Jatropha Genome Database
- JcCA0316111.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0316111.10 - phase: 0 /pseudo/partial
(3087 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29739.m003777 tpr repeat nuclear phosphoprotein, putative 2385 0.0
>29739.m003777 tpr repeat nuclear phosphoprotein, putative
Length = 3198
Score = 2385 bits (1203), Expect = 0.0
Identities = 1908/2145 (88%), Gaps = 3/2145 (0%)
Strand = Plus / Plus
Query: 547 gatccagaaaatgttgaagctcttgtagcccttgcaattttggatttgcaaacaaatgaa 606
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 598 gatccagaaaatgttgaagctcttgtatcacttgcaattttggatttgcaaacaaatgaa 657
Query: 607 gctgctggaataaggagaggaatggaaaaaatgcagaaagcttttgagatatacccctat 666
| | ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 658 gttaatggaataaggagaggaatggaaagcatgcagagagcttttgagatatatccctat 717
Query: 667 tgcgcaatggcattgaattatctagcgaatcacnnnnnnnncactggtcaacatttttta 726
|| ||||||||| |||||||| |||| |||||| ||| ||||| |||||||||
Sbjct: 718 tgtgcaatggcactgaattatttagcaaatcactttttcttcaccggtcagcatttttta 777
Query: 727 gtagagcaacttactgagactgcacttgctgtgaccaatcatggaccaacaaagtcacac 786
|| |||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||| |||
Sbjct: 778 gtcgagcaactaactgaaactgctcttgccgtgactaatcatgggccaacaaagtcgcac 837
Query: 787 tcttactacaacttggcacgttcctatcacagcaagggggactatgaaacagcttcaaga 846
|| | |||||| || ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 838 tcattctacaatttagcacgctcttaccacagcaagggggactatgaaacagcttcaagg 897
Query: 847 tactactgggcatctgtcaaagaaattaataagcccagtgaatttgtgtttccatattat 906
||||||||||||||||| || |||| |||||||||||||||||||||||||| ||||||
Sbjct: 898 tactactgggcatctgtgaaggaaaccaataagcccagtgaatttgtgtttccttattat 957
Query: 907 ggattgggacaagtacaactgaaattaggagatattaaaaatgcactgtcaaattttgaa 966
||| ||||||||||||| ||||| |||||||| |||||||||||| |||||||||| ||
Sbjct: 958 ggactgggacaagtacagctgaagttaggagagattaaaaatgcattgtcaaatttcgag 1017
Query: 967 aaggttttggaggtctatccagataattgtgagacattgaaagttcttgggcacatatat 1026
||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 1018 aaggttttggaggtctaccctgataactgtgagacattgaaagttcttgggcacatttat 1077
Query: 1027 gttcagcttgggcagactgagaaagctcaggaatttttgaggaaggctgcaaaaattgat 1086
| ||||||||||||||||||||| ||||| |||| ||||||||||||| |||||||||||
Sbjct: 1078 gctcagcttgggcagactgagaaggctcaagaatatttgaggaaggctacaaaaattgat 1137
Query: 1087 ccacgtgatgcacaggcgtttctcgacctcggtgaattgttaatttcatctgatacagga 1146
|| || ||||||||||| ||||| ||||| ||||||||| | |||||||| |||||||||
Sbjct: 1138 ccgcgggatgcacaggcatttctagacctgggtgaattgctgatttcatcagatacagga 1197
Query: 1147 gctgctcttgatgccttcaaaactgcacgcactctactgaccaagggaggtcaaaaagtg 1206
||||||||||||||||| ||||||||||||| ||| || | ||||||||||| |||||
Sbjct: 1198 gctgctcttgatgccttgaaaactgcacgcagtcttcttaaaaagggaggtcatgaagtg 1257
Query: 1207 ccaatcgaagttcttaacaatatcggagttatttattttgaaagagaagaacttgagcct 1266
||| | ||||| ||||| ||||| |||||||||||||| |||||||||||||| |||| |
Sbjct: 1258 ccagtagaagtgcttaataatattggagttatttatttcgaaagagaagaactggagctt 1317
Query: 1267 gctctggatgctttcaaggatgctctaggtgatggcatatggcgtgctttccttgatggt 1326
||||| || |||||||||| ||| |||||||||| ||||||| |||||| || ||||||
Sbjct: 1318 gctctagaaactttcaaggaggctgtaggtgatggaatatggcttgcttttctcgatggt 1377
Query: 1327 aaagcaaagacctataaaattgatgcagctgcatctgttctccaatacaaagacatgcag 1386
|||||||| ||||||| |||||||||||| |||||| |||| || ||||||||||||||
Sbjct: 1378 aaagcaaaaacctatacaattgatgcagcagcatctattctgcactacaaagacatgcaa 1437
Query: 1387 ttatttcatcgattagaggaagatggctttgatgtggaactaccttgggataaagtcaca 1446
|| ||||||| |||||| ||||||| | ||| |||||| ||||||||||||| ||
Sbjct: 1438 ttttttcatcagttagagcaagatggtcatcgtgtcgaactaacttgggataaagttact 1497
Query: 1447 gcgttgtttaacttggccagattacttgagcagatgcataacatagaaactgcaagtgtg 1506
||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct: 1498 gcgttatttaacttggccagattgcttgagcagatgcataatatagaaactgcaaatgtg 1557
Query: 1507 ttataccgtctcatagtgtttaagtatccagactatgtggatgcttatctaaggctggct 1566
||||| ||| ||| | ||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 1558 ctatacgttcttatattatttaagtatccagactacgtggatgcttacctgaggctggct 1617
Query: 1567 gccattgcaaaagctcgaaataatctccaactgagcattgaactggttaatgaggctctt 1626
|||||| ||||||||||||||||||| ||| | |||||||||||||| |||||||||||
Sbjct: 1618 gccatttcaaaagctcgaaataatcttcaattaagcattgaactggtcaatgaggctcta 1677
Query: 1627 aaggtgaatgataagtgcccaaatgcattatctatgcttggtgatctggagctgaaaaat 1686
||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 1678 aaggtgaatgacaagtgcccaaatgcgttatctatgcttggtgacttggagctgaaaaat 1737
Query: 1687 gatgactgggttaaggcaaaagaaaccttacgtgctgctagtgaagcaactgacgggaag 1746
|| || ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 1738 gacgattgggttaaggcaaaagaaacctttcgtgctgctagtgaagcaactgatgggaag 1797
Query: 1747 gattcttatgcgaccctctctctggggaactggaactactttgctgcaatacgcaatgag 1806
||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 1798 gattcttatgcgattctctctctggggaactggaactactttgctgcaatacggaacgag 1857
Query: 1807 aaaaggaatcccaagttggaggctacccacttggagaaggccaaggaactgtacaccaga 1866
||||| |||||||||||||| ||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 1858 aaaagaaatcccaagttggaagctactcacttggagaaagccaaggaactttataccaga 1917
Query: 1867 gttctggttcagcatacagctaatttatatgctgccaatggtgctggagtagtgttagca 1926
||| | |||||||||||||||||| ||||||| |||||||||||||||||||| || |||
Sbjct: 1918 gttttagttcagcatacagctaatctatatgccgccaatggtgctggagtagtcttggca 1977
Query: 1927 gaaaaagggcattttgatgtatctaaagatctttttacgcaggtccaagaggctgcaagc 1986
|| ||||| |||||||| || || ||||||||||||| | | |||||||||||||||||
Sbjct: 1978 gagaaaggacattttgacgtctcaaaagatctttttatggaagtccaagaggctgcaagt 2037
Query: 1987 ggaaacatttttgtccagatgccagatgtgtggataaacttagcacatgtttattttgct 2046
|| | ||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 2038 ggtagcatttttgttcagatgccagatgtgtggatcaacttggcacatgtctattttgct 2097
Query: 2047 caaggcaattttgctttggctgttaagatgtatcaaaattgtttgcggaagttttattat 2106
|||||||||||||| || ||||| |||||||||||||| |||||||||||||| || |||
Sbjct: 2098 caaggcaattttgcattagctgtgaagatgtatcaaaactgtttgcggaagttctactat 2157
Query: 2107 aatacagactctcaaattctcctgtatttggcccgtacacattatgaagctgaacagtgg 2166
| ||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||
Sbjct: 2158 agtacagactctcaaattctcttgtatttggctcgcacacattatgaagctgaacagtgg 2217
Query: 2167 caggactgcaagaaaactttactgagagccatccacttggcaccttcaaattacatatta 2226
||||| ||||||||||| ||||| ||||| |||||||||||||| ||||||||||| ||
Sbjct: 2218 caggaatgcaagaaaacattacttagagctatccacttggcaccatcaaattacattcta 2277
Query: 2227 agatttgatgcaggtgtggcgatgcaaaagttttcagcatcaacgctacaaaagacaaag 2286
|| |||||||||||||| || |||||||| || || ||||| || |||||||||||||||
Sbjct: 2278 aggtttgatgcaggtgttgcaatgcaaaaattctcggcatctacactacaaaagacaaag 2337
Query: 2287 agaactgtagatgaggtgcgctcaacagtagatgagctggaaaatgcagttcgtttattt 2346
||||| |||||||||||||||||||| || |||||||| |||||||| ||||||||||||
Sbjct: 2338 agaacagtagatgaggtgcgctcaacggttgatgagcttgaaaatgctgttcgtttattt 2397
Query: 2347 agtcagttatctgcttcttccaatcttcactttcatgggttcgatgaaaagaaaatcaac 2406
|| ||| | || ||||||||||| |||||||| |||||||| ||||| ||||| ||||||
Sbjct: 2398 agccagctgtcggcttcttccaaccttcacttccatgggtttgatgagaagaagatcaac 2457
Query: 2407 acacatgttgagtactgcaagcacttacttgaggctgcaaaagttcatcgtgaagcagct 2466
|| ||||||||||| |||||||| ||| | |||||||||||||||||||| |||||||||
Sbjct: 2458 actcatgttgagtattgcaagcatttattagaggctgcaaaagttcatcgcgaagcagct 2517
Query: 2467 gagcgtgaggagcagcagaaccggcagagacaggaagtggctcgtcagatggcattggct 2526
||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 2518 gagcgtgaggagcagcaaaaccggcaaagacaggaagttgctcgtcagatggcattggct 2577
Query: 2527 gaggatgcccgtcgcaaggctgaagaacaaaggaaatttcagttggagagaagaaaacaa 2586
||||| |||||||| |||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 2578 gaggaagcccgtcggaaggctgaagaacaaaagaaatttctgttggagaagagaaaacag 2637
Query: 2587 gagaatgaactaaaacgggtacggcaacaagaggagcattttgagcgtgtaaaggagcaa 2646
|| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2638 gaagatgaactaaaacgggtgcggcaacaagaggagcatttcgagcgtgtaaaggagcaa 2697
Query: 2647 tggaag---agtacatctgcttctaagcggagggacaggtctgag 2688
|||||| |||||| ||| |||||| ||||||||||| ||||||
Sbjct: 2698 tggaagactagtacacctggttctaaacggagggacagatctgag 2742
Score = 480 bits (242), Expect = e-134
Identities = 395/446 (88%)
Strand = Plus / Plus
Query: 13 gagtactttaaacaaggaaaacttgaacaattccgccagatattggaagaaggatccagt 72
||||| |||||||||||||||||||||||||| || ||||||||||| |||||||| |||
Sbjct: 145 gagtattttaaacaaggaaaacttgaacaatttcgacagatattggaggaaggatctagt 204
Query: 73 catgaaattgatgaatattatgccgatgttagatatgagaggatcgccatcctaaatgct 132
|||| |||||||| |||||||| ||||||| ||| || ||||| || |||||||||||
Sbjct: 205 aatgatattgatgagtattatgctgatgttaaatacgataggattgctatcctaaatgca 264
Query: 133 ttaggggcttactatagctatcttggaaaaattgagacaaaacaaagagaaaaggaggaa 192
|||||||| ||||||||||||||||| ||||||||||| || || || ||||||||||||
Sbjct: 265 ttaggggcatactatagctatcttgggaaaattgagacgaagcagagggaaaaggaggaa 324
Query: 193 cattttatacaggcgaccaaacactacaataaagcttcaaggattgacatgcatgagcct 252
| ||||||||||| |||| | |||| |||||||||||||||||||||||||||||||||
Sbjct: 325 tactttatacaggctaccagatactataataaagcttcaaggattgacatgcatgagcct 384
Query: 253 tctacttgggttgggaaaggtcagctgttactggccaagggtgaaatagaacaggcatct 312
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
Sbjct: 385 tctacttgggttgggaaaggtcagctgttacttgccaagggagaaatagaacaggcatat 444
Query: 313 aatgcatttaagatcgtactggagggagatcgtgataatgttgctgctcttttgggtcag 372
||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 445 aatgcttttaagattgtactggagggagatcgtgataatgtatctgctcttttgggtcag 504
Query: 373 gcttgtgttgagtacaatcgtggtcattacattgagtctttggcaagatacaagagggca 432
|| |||||||| ||||| || ||||||||| ||| |||||| | ||||||||||||
Sbjct: 505 gcatgtgttgaatacaaccgcagtcattacaatgaatctttgaaatcttacaagagggca 564
Query: 433 ttgcaagtttatcctaattgtcctgg 458
||||||| ||||| | ||||||||
Sbjct: 565 ctgcaagtgcatcctgagtgtcctgg 590
Score = 194 bits (98), Expect = 2e-48
Identities = 170/194 (87%)
Strand = Plus / Plus
Query: 2763 ctcaaagtcacactatgagatggaagaaggagaagctgacattatggatgatcatgaaga 2822
||||||||||| ||||||||| |||||||||||||||||||| |||||||||| ||||||
Sbjct: 2817 ctcaaagtcacgctatgagatagaagaaggagaagctgacatgatggatgatcgtgaaga 2876
Query: 2823 actggaagacgaagatgcaaatgtgaattacagggaacaaagagatcagatgaatgatca 2882
||||||| || ||||| |||||||||||| ||||||| | | | | | || || ||||
Sbjct: 2877 gttggaagatgaggatgccaatgtgaattacggggaacacaaaaaccggttggataatca 2936
Query: 2883 ggatgagaatgcagaagaaaatgctcacgaacgtcttgcagcagctgggcttgaagattc 2942
||| || ||||||||||||||||||| || | |||||||||||||||||||||||||||
Sbjct: 2937 ggacgaagatgcagaagaaaatgctcaggatcttcttgcagcagctgggcttgaagattc 2996
Query: 2943 tgatgcagaggatg 2956
||||||||||||||
Sbjct: 2997 tgatgcagaggatg 3010
Score = 58.0 bits (29), Expect = 3e-07
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 3039 catcaacaagtaggaggaggcgggcatggtcagaatccgatgatgatga 3087
|||||||| |||||||||| |||||| ||||||||| |||||||||||
Sbjct: 3020 catcaacagctaggaggaggagggcattgtcagaatctgatgatgatga 3068