Jatropha Genome Database
- JcCA0316001.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0316001.10 - phase: 0
(1797 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29693.m001992 9-cis-epoxycarotenoid dioxygenase, putative 1120 0.0
30202.m000262 9-cis-epoxycarotenoid dioxygenase, putative 72 1e-11
>29693.m001992 9-cis-epoxycarotenoid dioxygenase, putative
Length = 1824
Score = 1120 bits (565), Expect = 0.0
Identities = 1325/1582 (83%), Gaps = 6/1582 (0%)
Strand = Plus / Plus
Query: 187 gtaattcctaaagatgactcttttatcaccgtgaaacgcaaaacc---caccaccg---t 240
|||||||||| |||||||||||||| ||| || |||||||||||| |||||||| |
Sbjct: 208 gtaattcctacagatgactcttttaccactgtaaaacgcaaaaccagccaccaccgccat 267
Query: 241 caaccaccgcactggaaccttcttcaaaaagcagctgccatagctttagatgtggcggaa 300
|| ||||||||||||||||| ||||||| |||||| ||||||||||||||| |||| ||
Sbjct: 268 cagccaccgcactggaacctccttcaaagagcagcagccatagctttagatatggcagag 327
Query: 301 ggcgcgttggtatctaaggaacgccaacatcagctccctaaaactgctgatcctcgtgtc 360
| || | | ||| ||||||||||| || || || || ||||||||||| || |||
Sbjct: 328 agtgctgtaatctctcgtgaacgccaacaccaacttcccaagactgctgatccacgcgtc 387
Query: 361 caaatctccggaaattacgctccggtacctgaacagcccgtccggcagtctcttccggtg 420
|||||||||||||| || ||||| ||||| |||||||| |||||||| || ||||||||
Sbjct: 388 caaatctccggaaactatgctcctgtaccagaacagccagtccggcaatcacttccggtc 447
Query: 421 gccggaactatccctgattgtataaatggtgtttatgttcgaaacggtgctaatccactt 480
||||||| ||||| |||||||| |||||||| ||||| ||||||||||| || ||||||
Sbjct: 448 accggaacgatcccagattgtattaatggtgtctatgtacgaaacggtgccaacccactt 507
Query: 481 tttgagccaatcgccggccatcacttgtttgacggagacggcatggttcatgctgtcagt 540
||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||| |||
Sbjct: 508 tttgaaccaatcgccggccaccacttgtttgacggagacggtatggtccatgctgtgagt 567
Query: 541 atcaaaaacggcaatgcaagctacgcttgtcgttttactgaaacagagagattgaaacaa 600
|| ||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct: 568 attaaaaatggcaatgctagctatgcttgtcgtttcactgaaacagaaagattgaaacaa 627
Query: 601 gagagagaattgggcaggccagtgtttcctaaagcaattggtgagttacatggccattct 660
|| |||| |||||| ||||| ||||||||||||||||||||||| || ||||| || |||
Sbjct: 628 gaaagagtattgggtaggcccgtgtttcctaaagcaattggtgaattgcatggtcactct 687
Query: 661 ggtattgcaagattgctccttttttacgcaagaggattatgtgggctcgttgatcataca 720
|||||||| |||||||| |||||||| ||||||||||||||||| || |||||||||||
Sbjct: 688 ggtattgcgagattgctacttttttatgcaagaggattatgtggtcttattgatcataca 747
Query: 721 aaaggcactggagtagccaacgccggtcttgtctacttcaatgccaggcttcttgccatg 780
||||| ||||| ||||| ||||| |||||||| |||||||||| |||||||||||| |||
Sbjct: 748 aaaggaactggtgtagcaaacgctggtcttgtttacttcaatgacaggcttcttgctatg 807
Query: 781 tcagaagatgacgttccttatcaagtacgtatcactaacagtggcgatcttgaaactgtt 840
|| |||||||| |||||||| ||||| ||| ||||| ||| |||||||||||||||
Sbjct: 808 tctgaagatgatgttccttaccaagttcgtgtcactttttctggtgatcttgaaactgtt 867
Query: 841 gggcgacacgattttaatggccaattaaaaaatgcaatgattgctcatcccaaaattgat 900
|| || || ||||| | || ||| | || | | |||||||| ||||| || ||||||
Sbjct: 868 ggcagatacaattttgaaggtcaacttgaacacaccatgattgcacatccaaagattgat 927
Query: 901 ccagtttcaaaagagttatttgctcttagctacgacgtcgttcagaagccgtatctgaaa 960
|| ||||| |||||| | |||||||||||||| || ||| | || ||||||||||| ||
Sbjct: 928 cctgtttctaaagagatgtttgctcttagctatgatgtcatccaaaagccgtatcttaag 987
Query: 961 tatttcaaattttctcctgacggcaaaaaatcaccggacgttaatattcctctttcagtg 1020
|| |||| || | || || || | |||||||||||||||| |||| |||||| |||||
Sbjct: 988 tacttcaggttcttccccgatgggacaaaatcaccggacgttgatatccctcttccagtg 1047
Query: 1021 ccaacaatgatgcatgatttcgctatcacggaaaatttcgtggtgatccccgatcagcaa 1080
||||| |||||||||||||| ||||| || || ||||||||||| ||||| ||||| |||
Sbjct: 1048 ccaaccatgatgcatgattttgctattactgagaatttcgtggtaatccctgatcaacaa 1107
Query: 1081 gtcgttttcaagcttcaagaaatgataagaggtggctctcccgtagtttacgacaaagac 1140
||||||||||| ||||||||||||||||| ||||||||||| || |||| || ||||||
Sbjct: 1108 gtcgttttcaaacttcaagaaatgataagtggtggctctcctgttatttatgataaagac 1167
Query: 1141 aagaaatctcggtttggaattcttgcaaaaaatgctactgatgctgacaatattatttgg 1200
||||| ||||||||||| ||||||||||| |||||| ||||||| | |||||||||||
Sbjct: 1168 aagaagtctcggtttgggattcttgcaaagaatgctcgtgatgctaatgatattatttgg 1227
Query: 1201 gttgaatcgccggagacgttttgcttccatttgtggaatgcatgggaagagccggaatcc 1260
| |||||||| || || || || ||||||||||||||||||||||||||||| |||||
Sbjct: 1228 atagaatcgcccgatactttctgtttccatttgtggaatgcatgggaagagcctgaatca 1287
Query: 1261 gatgaaattgtggtgatcggatcttgcatgactccaccggactcaattttcaacgaatgt 1320
|||||| ||||||| ||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 1288 gatgaagttgtggtcatcggatcttgcatgactccaccggactccatttttaatgaatgt 1347
Query: 1321 gatgaaagtttaaaaagcgtattgtcggaaatcagactgaatttaaagacgggtaagtcc 1380
||||| |||||||| || ||||| || |||||| | || ||||||| ||| ||||| |||
Sbjct: 1348 gatgagagtttaaagagtgtattatctgaaatccgcctcaatttaaggacaggtaaatcc 1407
Query: 1381 acgcgccgccctataattcaagaatcaaaccaagtaaatttagaggccggaatggttaac 1440
||||||||| ||||||||||||||||| || || || || |||||||| ||||| |||
Sbjct: 1408 acgcgccgcgaaataattcaagaatcaaatcaggtgaacttggaggccgggatggtgaac 1467
Query: 1441 cggaaccgcttaggaagaaagagtcaatacgcttatttagccattgctgagccatggcct 1500
| ||||| | || ||||||| || ||| | |||| | || || | |||||| |||||
Sbjct: 1468 agaaaccgtattggtagaaagactcgatatgtttatcttgctatcgttgagccgtggcca 1527
Query: 1501 aaagtttccggtttcgcgaaagtggatctttttactggtgaggtnnnnnnncatatttac 1560
|| ||||| ||||| || |||||||||||||||||||| ||||| ||||||||
Sbjct: 1528 aaggtttcgggttttgctaaagtggatctttttactggagaggtaaagaaatatatttac 1587
Query: 1561 ggcgataaaaaatatggtggtgagccannnnnnnngccaagagacccaaatagcgaaaat 1620
|| |||||||||| ||| || |||||| ||||||||| || ||||||||| |
Sbjct: 1588 ggtgataaaaaatttggcggcgagccatttttcttgccaagagatcctaatagcgaagaa 1647
Query: 1621 gaagatgatgggtacattctggcttttgttcatgatgagaagaaatgcaaatcagagctt 1680
|||||||| |||||| |||| |||||||||||||| || ||||| |||||||||||||||
Sbjct: 1648 gaagatgacgggtacgttcttgcttttgttcatgacgaaaagaagtgcaaatcagagctt 1707
Query: 1681 caaatagtaaatgccattaatttacagttagaagcttcaatcaaactgccatcaagagtg 1740
||||| || ||||||| |||||||||||||||||||| | || ||||||||||| ||
Sbjct: 1708 caaattgtgaatgccacgaatttacagttagaagcttcggttaagctgccatcaagggta 1767
Query: 1741 ccatatgggtttcatgggacat 1762
|| ||||| |||||||| ||||
Sbjct: 1768 ccttatggatttcatggcacat 1789
>30202.m000262 9-cis-epoxycarotenoid dioxygenase, putative
Length = 1812
Score = 71.9 bits (36), Expect = 1e-11
Identities = 132/164 (80%)
Strand = Plus / Plus
Query: 1225 ttccatttgtggaatgcatgggaagagccggaatccgatgaaattgtggtgatcggatct 1284
|||||| | ||||| || ||||| ||||| ||| ||||||| |||| ||| | || |||
Sbjct: 1243 ttccatctctggaacgcctgggaggagcccgaaaccgatgaggttgttgtggttgggtct 1302
Query: 1285 tgcatgactccaccggactcaattttcaacgaatgtgatgaaagtttaaaaagcgtattg 1344
|| |||||||| || || |||||||||||||||||||| || ||| |||| || || |
Sbjct: 1303 tgtatgactcctcctgattcaattttcaacgaatgtgaagagagtctaaagagtgttcta 1362
Query: 1345 tcggaaatcagactgaatttaaagacgggtaagtccacgcgccg 1388
|| |||||||| || ||| ||||||| |||||||| || |||||
Sbjct: 1363 tcagaaatcaggctaaatctaaagaccggtaagtctactcgccg 1406