Jatropha Genome Database
- JcCA0315941.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0315941.10 - phase: 0
(1035 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29703.m001506 Gibberellin receptor GID1, putative 1041 0.0
30128.m008695 Gibberellin receptor GID1, putative 232 3e-60
30032.m000456 conserved hypothetical protein 64 2e-09
>29703.m001506 Gibberellin receptor GID1, putative
Length = 1038
Score = 1041 bits (525), Expect = 0.0
Identities = 906/1033 (87%)
Strand = Plus / Plus
Query: 1 atggctggtagtaatgaagtcaacctcaatgaatccaagagggttgtgccactaaacaca 60
|||||||||| ||| |||||||||||||||||||| |||||||| || || | ||||||
Sbjct: 1 atggctggtactaacgaagtcaacctcaatgaatctaagagggtagttcctttgaacaca 60
Query: 61 tgggtcctcatttcaaatttcaagctagcatataatctccttcgccgcccggatgggagc 120
||||| ||||| |||||||||||||||||||||||||||||||| ||||| || || |
Sbjct: 61 tgggttctcatctcaaatttcaagctagcatataatctccttcgacgcccagacggaaca 120
Query: 121 tttaatcgtgatttggcagagtttcttgaccggaaagtcaatgccaacaccattccggtt 180
|| |||||||||||||| ||||| |||||||| ||||| |||||||||||||| || |||
Sbjct: 121 ttcaatcgtgatttggcggagttccttgaccgtaaagttaatgccaacaccatcccagtt 180
Query: 181 gatggagttttctcctttgatcatgtagacagagccacaggcctccttaaccggatttac 240
||||| |||||||| ||||||||||| || ||||||||| |||| ||||||||| ||||
Sbjct: 181 gatggtgttttctcttttgatcatgttgatagagccacaagccttcttaaccgggtttat 240
Query: 241 caacctgcccctgaaaatgaggctcagtggggcattgtagagcttgaaaagcctttgagc 300
| |||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct: 241 ctacctgctcctgaaaatgaagctcagtggggcattgttgagcttgagaagcctttgagt 300
Query: 301 acaactgagattgtcccagttataatcttcttccatggtggaagcttcactcactcctct 360
|| | |||||||||||||||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 301 actagtgagattgtcccagttattatcttttttcatggtggaagcttcactcactcctct 360
Query: 361 gccaatagtgctatctacgacaccttttgtcgccgccttgtgaatgtttgcaaagctgtt 420
||||||||||||||||| ||||||||||||||||| | |||| ||| || || |||
Sbjct: 361 gccaatagtgctatctatgacaccttttgtcgccgtttagtgagcacttgtaatgccgtt 420
Query: 421 gtagtatctgttaattatcgccggtcacctgaatatcgctacccatgtgcatatgatgat 480
|| |||||||| || ||||| |||| ||||||||||| || || |||||||||||||||
Sbjct: 421 gttgtatctgtcaactatcgtaggtcgcctgaatatcggtatccttgtgcatatgatgat 480
Query: 481 ggttgggcagcttttaagtgggttaaatcaagaacttggcttcaaagtgggaaggattcg 540
|||||||||||| | ||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 481 ggttgggcagctctaaagtgggttaaatcaagaacttggcttcaaagtggaaaagattca 540
Query: 541 aaagttcatgtatatttggcaggggatagttcaggtggtaatatagctcaccatgttgca 600
|| |||||||||||||| || || |||||||||||||||||||||||||| ||||| |||
Sbjct: 541 aaggttcatgtatatttagctggagatagttcaggtggtaatatagctcatcatgtagca 600
Query: 601 gttagagcagcagaagcagaaattgaggtattgggtaatattcttcttcatccaatgttt 660
|| |||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 601 gtaagagcagcagaagctgaaattgaggtattgggtaatgtacttcttcatccaatgttt 660
Query: 661 ggcgggcaaatgagaactgaatcggagcaaagattagatggaaaatattttgttacaact 720
|| ||||| ||||||||||| ||| | || |||||||| ||||||||||| ||||
Sbjct: 661 ggggggcatgaaagaactgaatcagagaagaggttagatgggaaatattttgtaacaata 720
Query: 721 caagaccgcgattggtattggagagcatatctacccgaaggggaagatagagaccatcca 780
||||| || ||||||||||||||||||| |||||| ||||||||||||||||| |||||
Sbjct: 721 caagatcgtgattggtattggagagcatttctacctgaaggggaagatagagatcatccg 780
Query: 781 gcgtgcaatatatttggtccaagagggaaaaaccttgaaggaattaattttcctaaaagt 840
|||||||||||||| ||||| || | ||||| || || | |||| || || ||||||
Sbjct: 781 gcgtgcaatatattcggtcctagggccaaaaatctccaacaacttaagttccccaaaagt 840
Query: 841 ctagttgttgtggctggtttggatcttgttcaagattggcaattagcttatgttgaaggg 900
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 841 ctagttgttgtggctggtttggatcttgtccaagattggcaattagcttatgttgaaggg 900
Query: 901 ctccagaaagctggccatgaagtgaaacttctttatctaaggcaagctacaataggtttc 960
||||| |||||||||||| |||||||||||||||||||| || ||||||||||| |||
Sbjct: 901 ctccaacaagctggccatggagtgaaacttctttatctaaaacaggctacaatagggttc 960
Query: 961 tactttttaccaaataatgatcacttctattgcctaatggaggaaattaaagcctttgtt 1020
|||||||| ||||||||||| ||||||||| |||| |||||||| |||| | ||||||
Sbjct: 961 tactttttgccaaataatgagcacttctatagcctcatggaggagattagaagctttgtc 1020
Query: 1021 aatcctaactgtt 1033
|||||||||||||
Sbjct: 1021 aatcctaactgtt 1033
>30128.m008695 Gibberellin receptor GID1, putative
Length = 1035
Score = 232 bits (117), Expect = 3e-60
Identities = 525/661 (79%)
Strand = Plus / Plus
Query: 326 tcttcttccatggtggaagcttcactcactcctctgccaatagtgctatctacgacacct 385
||||||||||||||||||| || | ||||||||||| || |||||||| || |||||
Sbjct: 326 tcttcttccatggtggaagttttgcacactcctctgcaaacagtgctatatatgacacac 385
Query: 386 tttgtcgccgccttgtgaatgtttgcaaagctgttgtagtatctgttaattatcgccggt 445
| |||||||| || ||| |||||| ||||| || || ||||| |||||| | ||
Sbjct: 386 tatgtcgccgactggtgggcatttgcagggctgtggtggtttctgtgaattatagacgtg 445
Query: 446 cacctgaatatcgctacccatgtgcatatgatgatggttgggcagcttttaagtgggtta 505
| |||||| |||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||
Sbjct: 446 cgcctgaaaatcgatacccatgtgcttatgatgatggatggacagctcttaagtgggtta 505
Query: 506 aatcaagaacttggcttcaaagtgggaaggattcgaaagttcatgtatatttggcagggg 565
| |||||||| ||||| | ||| ||| ||| | ||||||||| | || ||||||||||
Sbjct: 506 attcaagaacatggctcgagagtaagaaagatgccaaagttcatatgtacttggcagggg 565
Query: 566 atagttcaggtggtaatatagctcaccatgttgcagttagagcagcagaagcagaaattg 625
|||| || |||||||| || | ||||||||||| | |||||| || ||| |||||
Sbjct: 566 atagctctggtggtaacattgtacaccatgttgctttaagagcactggagtcaggaattg 625
Query: 626 aggtattgggtaatattcttcttcatccaatgtttggcgggcaaatgagaactgaatcgg 685
| |||||||| || || || ||| | ||||||||||| || ||| ||||| ||||| |
Sbjct: 626 aagtattggggaacatactgcttaacccaatgtttggtggacaagaaagaacagaatcag 685
Query: 686 agcaaagattagatggaaaatattttgttacaactcaagaccgcgattggtattggagag 745
|| | |||||||||| ||||||||||| ||| ||||||||| || |||||||||||||
Sbjct: 686 agaagcgattagatgggaaatattttgtcacagttcaagaccgggactggtattggagag 745
Query: 746 catatctacccgaaggggaagatagagaccatccagcgtgcaatatatttggtccaagag 805
| | || || || | | |||||| || ||||| || || ||| ||||||||||| ||
Sbjct: 746 ctttcctccctgaggaagcagatagggatcatccggcatgtaatccatttggtccaaaag 805
Query: 806 ggaaaaaccttgaaggaattaattttcctaaaagtctagttgttgtggctggtttggatc 865
| | || ||||||||||| || || || || || || ||||| ||||||||||||||||
Sbjct: 806 gaagaagtcttgaaggaatgaagttcccaaagagccttgttgtggtggctggtttggatc 865
Query: 866 ttgttcaagattggcaattagcttatgttgaagggctccagaaagctggccatgaagtga 925
|| |||| || |||||||| |||||||||||||||||| | || |||||||| | ||||
Sbjct: 866 ttattcaggactggcaattggcttatgttgaagggctcaaaaaggctggccaagttgtga 925
Query: 926 aacttctttatctaaggcaagctacaataggtttctactttttaccaaataatgatcact 985
||||||| ||||| |||||| ||||| || |||||||| || || ||||| ||||||
Sbjct: 926 aacttctatatcttgagcaagcaacaattggcttctacttgttgcctaataacaatcact 985
Query: 986 t 986
|
Sbjct: 986 t 986
Score = 123 bits (62), Expect = 2e-27
Identities = 134/158 (84%)
Strand = Plus / Plus
Query: 1 atggctggtagtaatgaagtcaacctcaatgaatccaagagggttgtgccactaaacaca 60
|||||||| ||||||||||| |||||||||||| ||||| ||| || |||||||||||
Sbjct: 1 atggctggaagtaatgaagttaacctcaatgaaagcaagatggtggttccactaaacact 60
Query: 61 tgggtcctcatttcaaatttcaagctagcatataatctccttcgccgcccggatgggagc 120
|||||||||||||| ||||||||||| || || || || ||||| ||||| ||||| |
Sbjct: 61 tgggtcctcatttccaatttcaagctggcttacaaccttcttcgtcgccctgatggcact 120
Query: 121 tttaatcgtgatttggcagagtttcttgaccggaaagt 158
|| ||||| | ||||||||||| ||||||||||||||
Sbjct: 121 ttcaatcgccacttggcagagttccttgaccggaaagt 158
>30032.m000456 conserved hypothetical protein
Length = 189
Score = 63.9 bits (32), Expect = 2e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 atggctggtagtaatgaagtcaacctcaatgaatccaaga 40
|||||||| |||||||||||||||||||||||||| ||||
Sbjct: 1 atggctggaagtaatgaagtcaacctcaatgaatctaaga 40