Jatropha Genome Database
- JcCA0315891.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0315891.20 + phase: 0
(2100 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30076.m004450 sensory transduction histidine kinase, putative 523 e-147
29866.m000621 conserved hypothetical protein 115 1e-24
>30076.m004450 sensory transduction histidine kinase, putative
Length = 2094
Score = 523 bits (264), Expect = e-147
Identities = 476/548 (86%), Gaps = 9/548 (1%)
Strand = Plus / Plus
Query: 109 tcatcggaggtggttcgatgggaaaagtttcttccaaggatggtacttagagttctgtta 168
||||||||||||||||||||||| |||||||| |||| ||||| ||| ||||| | |||
Sbjct: 76 tcatcggaggtggttcgatgggagaagtttctaccaaatatggtgcttcgagttttatta 135
Query: 169 gttgaggccgatgactctacgcgccagattatcgctgctcttcttcgaaaatgcagttac 228
||||| || ||| | ||||| |||||||||||| ||||||||||||| |||||||| |||
Sbjct: 136 gttgaagctgattattctactcgccagattatctctgctcttcttcgtaaatgcagctac 195
Query: 229 agagttgctgctgttcctgatggattaatggcatgggagaccttaaagggtaggccccat 288
||||||||||||||||||||||| || ||||| |||||||||||||||| | | ||| |
Sbjct: 196 agagttgctgctgttcctgatggtttgatggcctgggagaccttaaaggatggacccaac 255
Query: 289 agcatagatctcattttaacagaagtagagttgccatcaatatcgggatacgcactgctt 348
| ||| |||||||| |||||||||||||| ||||||| |||||| ||||| |||||||||
Sbjct: 256 aacattgatctcatattaacagaagtagatttgccattaatatcaggatatgcactgctt 315
Query: 349 actttggtcatggagcatgacatttgcaaaaatattcctgtcataatgatgtcgtcgcat 408
||| |||||||||||||||| |||||||||| ||||| |||||||||||||| || |||
Sbjct: 316 actctggtcatggagcatgatttttgcaaaaacattccagtcataatgatgtcatcacat 375
Query: 409 gattcaattagcatggttttgaagtgcatgttgaagggtgcagctgactttctcattaag 468
|| |||||||| | || |||||||||||||| || || |||||||||||||||||||||
Sbjct: 376 gactcaattagtaaagtcttgaagtgcatgttaaaaggcgcagctgactttctcattaag 435
Query: 469 cctgttaggagaaatgagctgaggaacctctggcggcatgtttggaggaggcaaaatcta 528
||||||||||||||||| |||| ||||||||||| ||| |||||||| ||||||| ||||
Sbjct: 436 cctgttaggagaaatgaactgaagaacctctggcagcacgtttggagaaggcaaactcta 495
Query: 529 actgctggacatattcctcaaagttcacctgatgcacagcataaagttgaagctgcctct 588
|| |||||| |||| |||| || |||||| |||||||||||| |||||||||||| ||
Sbjct: 496 accgctggaaatatccctccaaattcacccaatgcacagcatagagttgaagctgcatc- 554
Query: 589 gaaaacaattcagctagtgatcactcaagtgattgtgcaacttcatcacataaaagaaag 648
|||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 555 --------ttcagcaagtgatcactcaagtgattgtgcaacttcttcacataaaagaaag 606
Query: 649 gaatgcag 656
||||||||
Sbjct: 607 gaatgcag 614
Score = 202 bits (102), Expect = 6e-51
Identities = 346/426 (81%), Gaps = 6/426 (1%)
Strand = Plus / Plus
Query: 1038 tggagctattgatttgattggtacatttgataatggcccaaagcacacatatgtagacac 1097
||||| |||||| ||||||||||||||||||||||||||||||| |||| || |||||
Sbjct: 981 tggagttattgacttgattggtacatttgataatggcccaaagcgtacatgtggagacat 1040
Query: 1098 aaatataaaggatggtaccaacaagtttgaattcactcc---actggaactttctctaag 1154
|| ||||| ||| || | ||||||| ||||||| || | ||||||||||||||| ||
Sbjct: 1041 aagcataaatgatagtgcgaacaagtctgaattcccttctcaactggaactttctctcag 1100
Query: 1155 aagattttttcccaatagctcaaagaatcaaggcattgaggataggcatgcactaaacca 1214
||| || ||||| ||||||| ||||| |||| ||||||| |||| ||||||||| ||
Sbjct: 1101 aaggttctttccaaatagcttgaagaaccaagtggttgaggaaaggcgtgcactaaatca 1160
Query: 1215 ttctaatgcctctgctttttcatggta---taacaataagatattgcaacctctttttcc 1271
|||||||||||| ||||||||| |||| || | ||||||||||||||| ||||||||
Sbjct: 1161 ttctaatgcctcagctttttcacggtatagtagtagtaagatattgcaaccactttttcc 1220
Query: 1272 aacatcaaccagtaattgtattgagttcagggaagatactagtaagtctccagagatgtc 1331
||||||||||||||||| || ||||| | |||||| | |||||||| || ||| ||||
Sbjct: 1221 aacatcaaccagtaattatacagagtttaaggaagactcaagtaagtcgcctgagctgtc 1280
Query: 1332 atccaatgaacgttctcaaaagatcaatggtttttctcaacaacatggtcccaatttgaa 1391
||||||| || ||||||||| ||| | | ||||||||||| ||| | ||| |||
Sbjct: 1281 atccaatcaaatttctcaaaatgctaatagcgtctctcaacaacaaggttctaatccgaa 1340
Query: 1392 tggtggtcaagaaattatgaccacactagttattggtcaatctaggcaagctgaactagc 1451
||| ||||||| ||||| |||| || || |||||||||||| || || |||||||||
Sbjct: 1341 tggcagtcaagatattatcaccaacctggtcattggtcaatctgggaaatgtgaactagc 1400
Query: 1452 atatcc 1457
||||||
Sbjct: 1401 atatcc 1406
Score = 170 bits (86), Expect = 2e-41
Identities = 134/150 (89%)
Strand = Plus / Plus
Query: 1920 tcgctccagccaaagagaagctgctctgacaaagttcaggctgaagcgaaaagatcgatg 1979
||||| ||||||||||||||| ||| ||||||||||| | |||||||| |||||||| ||
Sbjct: 1908 tcgcttcagccaaagagaagcagctttgacaaagttccgactgaagcggaaagatcgctg 1967
Query: 1980 ctatgagcaaaaggttcggtaccaaagccgaaaaagactagcggagcagcgtcctagagt 2039
||||||| |||||||||| || |||||||| ||||||||||| |||| |||||| || ||
Sbjct: 1968 ctatgagaaaaaggttcgatatcaaagccggaaaagactagcagagctgcgtccaagggt 2027
Query: 2040 gaaagggcagtttgttcgtcaagtacaaaa 2069
|||||||||||||||||||||||| |||||
Sbjct: 2028 gaaagggcagtttgttcgtcaagtgcaaaa 2057
Score = 107 bits (54), Expect = 3e-22
Identities = 210/262 (80%)
Strand = Plus / Plus
Query: 1567 aaactgtccagccagcgagaccagtctccatttgcaactagcacctctattcattcaaat 1626
|||||| ||||||| |||| |||||||||||| | | ||||||||| ||||||||||||
Sbjct: 1525 aaactggccagccaaagagaacagtctccatttcctattagcacctcaattcattcaaat 1584
Query: 1627 cctgaaattcatgactctgagcagaataatagacaatccgatgacattaccatcaattct 1686
||||||||||| ||||| || ||||||||||| || | ||| | | | | | |
Sbjct: 1585 cctgaaattcaggactcggaaggaaataatagacagtctgctgaaactgctactgctccc 1644
Query: 1687 gtggaccaaaatttgtataagcacgataatatggagcaggtggaggaactgagacatagt 1746
||||| || ||| || | |||| | ||||||||||| |||||||||| ||| ||
Sbjct: 1645 gtggagcagaatatgcaccagcagaacaatatggagcatcccgaggaactgaagcatggt 1704
Query: 1747 tcacctgctgccggtcaaagtactagcagtagcatgtgtaatggcattgcagatcacaat 1806
||||||||||| ||||| || ||| ||||||||||||| ||| || ||||||||||||||
Sbjct: 1705 tcacctgctgctggtcagagcactggcagtagcatgtgcaatagctttgcagatcacaat 1764
Query: 1807 aaaagcagtgcatatggaagct 1828
|| ||||| |||||||||||||
Sbjct: 1765 aacagcagcgcatatggaagct 1786
Score = 58.0 bits (29), Expect = 2e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 741 ttcacagccaaagcttaggagtgcttcaaatctgagcaatatggaggaagaat 793
||||||||||||| ||| ||| |||||||||| |||||||||||| ||||||
Sbjct: 639 ttcacagccaaagtgtagaagttcttcaaatctaagcaatatggagaaagaat 691
>29866.m000621 conserved hypothetical protein
Length = 2004
Score = 115 bits (58), Expect = 1e-24
Identities = 205/254 (80%)
Strand = Plus / Plus
Query: 166 ttagttgaggccgatgactctacgcgccagattatcgctgctcttcttcgaaaatgcagt 225
|||||||| || ||||| ||||| | |||||||| |||||||||||| | ||||| ||
Sbjct: 142 ttagttgaagctgatgattctaccaggcagattattgctgctcttcttaggaaatgtagc 201
Query: 226 tacagagttgctgctgttcctgatggattaatggcatgggagaccttaaagggtaggccc 285
|||| |||||| |||||||||||||| |||| ||||||||||| | || || | |||
Sbjct: 202 tacaaagttgccgctgttcctgatggcttaaaggcatgggagatgctcaaaggaaaaccc 261
Query: 286 catagcatagatctcattttaacagaagtagagttgccatcaatatcgggatacgcactg 345
|||| ||||| |||||||| |||||||| || || || |||||||| ||||| || ||
Sbjct: 262 cataatatagacctcattttgacagaagtggaattaccttcaatatctggatatgccctt 321
Query: 346 cttactttggtcatggagcatgacatttgcaaaaatattcctgtcataatgatgtcgtcg 405
||||| | | ||||||||||| ||||||||||| || || || ||||||||||| ||
Sbjct: 322 cttacactaattatggagcatgagatttgcaaaaacataccagttataatgatgtcctca 381
Query: 406 catgattcaattag 419
|| |||||| ||||
Sbjct: 382 caagattcagttag 395