Jatropha Genome Database
- JcCA0315811.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0315811.20 + phase: 0 /pseudo
(2216 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006484 leucine-rich repeat containing protein, putative 1031 0.0
29838.m001641 leucine-rich repeat containing protein, putative 76 1e-12
28490.m000028 transferrin, putative 72 2e-11
29838.m001649 phosphoprotein phosphatase 66 1e-09
30190.m011052 leucine-rich repeat-containing protein, putative 66 1e-09
29757.m000716 hypothetical protein 64 4e-09
29910.m000950 TMV resistance protein N, putative 62 2e-08
30074.m001357 TMV resistance protein N, putative 62 2e-08
30099.m001682 hypothetical protein 60 6e-08
30074.m001350 TMV resistance protein N, putative 58 2e-07
29910.m000957 TMV resistance protein N, putative 56 9e-07
29757.m000712 leucine-rich repeat-containing protein, putative 54 4e-06
28525.m000274 TMV resistance protein N, putative 54 4e-06
29801.m003132 Disease resistance protein RPS2, putative 54 4e-06
29801.m003134 leucine-rich repeat-containing protein, putative 54 4e-06
29929.m004540 ATP binding protein, putative 54 4e-06
>30169.m006484 leucine-rich repeat containing protein, putative
Length = 4212
Score = 1031 bits (520), Expect = 0.0
Identities = 1325/1592 (83%), Gaps = 1/1592 (0%)
Strand = Plus / Plus
Query: 617 taggaatttggggaatgggtggtattggcaaaaccaccattgctagagctctgtttgatc 676
||||||| |||||||||||||||||||| || || |||| || | |||| ||||| ||
Sbjct: 662 taggaatctggggaatgggtggtattggtaagacaaccaccgccaaagctttgtttactc 721
Query: 677 aaatctctaatgattttgaagctgcttattttgttgcaaatgttagggaagaatcagaaa 736
| |||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 722 agatctctaacgaacttgaagctgcttattttgtcgcaaatgttagggaagaatcagaga 781
Query: 737 aacgtacactacttcgtttacgagatgaaattctttcaaaaattttggaggacaaaaatt 796
|||| ||| | |||||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 782 aacggacagtggttcgtttacgagatgaaattctttcaaacattttagaggaggaaaatt 841
Query: 797 taaatatagggatgcgtagcgtattacccaggttaattgtgaacatacttcgacggaaaa 856
|| | | || ||| | ||| ||||||| ||||| ||| |||| | ||| ||||||||||
Sbjct: 842 tacacttgggaatgagaagcatattacctaggttcattttgaatagactgcgacggaaaa 901
Query: 857 ggatccttattgttcttgatgatgttagtaatttacaacaattgacaactttagctggag 916
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 902 ggatccttattgttcttgatgatgttagtaatgtagaacaattgacaactttagctggag 961
Query: 917 atcataattggtttggtttaggaagtagaatcattataacaagtagagataagcaagtgc 976
| |||| ||||||||||| ||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 962 accatagttggtttggttcaggaagtagggtaattataacaagcagagataagcaagtgc 1021
Query: 977 ttatgaataaagctgataaaatatatgaggttaagggattgaatcactatgaagctcttc 1036
|| | ||| |||||| | |||||||||||| |||||||||||| ||| |||||||||||
Sbjct: 1022 ttgttaatgcagctgacagaatatatgaggtaaagggattgaattactgtgaagctcttc 1081
Query: 1037 aattacttagtttgaaggcttttaagcaaaatcatccctttgaagattatttagagttgt 1096
| |||| || || || | || || ||||||||||| | |||| |||| |||||||||
Sbjct: 1082 agctactcagcttcaaagtgttcaaacaaaatcatcctgtagaaggttatatagagttgt 1141
Query: 1097 cacaaagggttgtctgttatactaaaggtgttcctttagctcttaatgttttgggttcat 1156
| |||||||||| |||||||||||||| |||||||||||||||||||||| ||| |
Sbjct: 1142 cgaaaagggttgtaaactatactaaaggtgtccctttagctcttaatgttttggcttctt 1201
Query: 1157 ttttgtacaacaagcaaatagaggaatgggaatgcacattagataagctagaagaatatc 1216
| | |||| |||||||| ||||||||| | | || ||||| || |||||||||| |
Sbjct: 1202 tcctatacagcaagcaaagggaggaatggacaagtaccttagagaaactagaagaatctt 1261
Query: 1217 ctaatttagaaattcaaaaggtgttaaagatgagttttgatgaattagagtcggtagata 1276
| ||| | |||||||| |||||||| || || |||| ||||||||| || | ||||||||
Sbjct: 1262 cgaatctggaaattcagaaggtgttgaaaataagttatgatgaattggaatgggtagata 1321
Query: 1277 aggatatatttcttgacattgcatgttttttcaaaggagaagatttagattgtgtaatga 1336
||||||| || ||||| ||||| ||||| || ||||| | || |||||| ||| | |
Sbjct: 1322 aggatattttccttgatattgcttgtttctttaaaggtgctgacgtagattatgttacaa 1381
Query: 1337 gtattctagatggttgtgaattttttccaaatattgggattagtcgtcttattgatatga 1396
|||||| ||||||||||| ||||| |||| ||||| || |||||||| |||||| ||
Sbjct: 1382 ctattcttgatggttgtgattttttcccaagcattggaataagtcgtctagttgataaga 1441
Query: 1397 gcctcatatccgtggtagagaacaagttagatatgcatgatttgctacaagaaatgggtc 1456
| || ||| | | |||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 1442 gtctgatagctattatagataataagttagatatgcatgatttgctacaagaaatgggtc 1501
Query: 1457 aggatattgttcggcaagaatcaaataaaaagcctggagaacgtagcaggttatggattc 1516
|| ||||||| | | ||||||||| | |||| |||||| || |||||| || |||| ||
Sbjct: 1502 agcatattgtccagaaagaatcaagtgaaaatcctggaaaaaatagcagattgtggactc 1561
Query: 1517 ctgaaaacattcatcatgtattgaccaagaataaggcgaacattgcaactgaaggcatat 1576
|||||| || ||||||||||| || ||| | || || |||||||||||||||| |
Sbjct: 1562 ctgaaagtatccatcatgtattaacagggaacagggggacttttgcaactgaaggcatct 1621
Query: 1577 tcttagacatctccaagattgaaaaagtaaacttaagtcctgtagttttctcaagaatgt 1636
| | ||||||||||| ||||| |||||| |||||||| |||||| || |||| |||||
Sbjct: 1622 ttctggacatctccaaaattgagaaagtagacttaagttctgtagccttttcaaaaatgt 1681
Query: 1637 gtaacctgagattgctcaaattatatcacaatagctctttgtcatggaaaaatccaactg 1696
| || ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||
Sbjct: 1682 ggaatctgagattgctcaaattctatcacaacagcttcttgtcatggaaaaatcctactg 1741
Query: 1697 gctttgtgtcagaatctgcagcagactcaagtgatggccttcaatctcttcctgataagc 1756
||||||| ||||||||| || |||||| ||||||| ||||||||||||||| | ||||
Sbjct: 1742 gctttgtatcagaatctacactggactcacgtgatggtcttcaatctcttcctaacaagc 1801
Query: 1757 tatgttatttccattggcatggatacccttgggattctttgccctctaatttttctatgg 1816
|||||| | |||||||||||||||| || ||||| || ||||| ||||||||||| ||||
Sbjct: 1802 tatgttttctccattggcatggatatccatgggaatcgttgccgtctaatttttcaatgg 1861
Query: 1817 agaatcttgtcgaacttaacatgccctttagcaaagttaaagaactttggaatggagtta 1876
|||| || || |||||||||||||| |||||| ||||||||||||| |||| ||||||||
Sbjct: 1862 agaacctggttgaacttaacatgccttttagccaagttaaagaactctggactggagtta 1921
Query: 1877 agcctcttgaaaagttaaaaagggttgatcttcatgattctgagcacctgacaacactcc 1936
||| |||| |||||||||| | ||||||||||||||||||||| |||| |||||| |
Sbjct: 1922 agcatcttcaaaagttaaagctgcttgatcttcatgattctgagctcctggtaacacttc 1981
Query: 1937 ctgatctttcttccgctttcaacttagagaggctaattcttgataattgtacaagtttac 1996
| ||||||||||| |||| |||||||| | | |||||||| |||| || ||||||||||
Sbjct: 1982 cagatctttcttcagcttcgaacttagaaaagataattcttaataactgcacaagtttac 2041
Query: 1997 tagagattccctcctcaattcagtttctccacaatcttgtttatcttagtttatctaatt 2056
| |||||||| || || ||||||| |||| ||| ||||| | |||||| || |||||||
Sbjct: 2042 ttgagattccatcttccattcagtgcctccgcaagcttgtctgtcttagcttgtctaatt 2101
Query: 2057 gcaaagagctgcaaagtcttccaagcctcagttctttgaaatctcttacggttcttaatc 2116
||||||||||||| |||||||||||||||| | ||||||| | ||||| | ||||||||
Sbjct: 2102 gcaaagagctgcagagtcttccaagcctcattcctttgaagtatcttaagactcttaatc 2161
Query: 2117 tctctaactgtttaaacttgaagaagtttccagaaattttctgaggacttagaagagttg 2176
| |||| ||| | |||| | |||||||||||||||| |||| | ||| ||||||| ||
Sbjct: 2162 tttctagctgctcaaaccttaagaagtttccagaaa-tttcaggggagatagaagaactg 2220
Query: 2177 catttagatggaactggagtggaagaatggcc 2208
||||| |||||||||||| ||||||| |||||
Sbjct: 2221 catttggatggaactggactggaagagtggcc 2252
Score = 56.0 bits (28), Expect = 9e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 253 tcttcaaattggtgcttagatgagcttgaaaagataattcaatgcaaggaaa 304
||||||| |||||| ||||||||||||| |||||| ||| ||||||| ||||
Sbjct: 262 tcttcaagttggtgtttagatgagcttgtaaagatcattgaatgcaaagaaa 313
>29838.m001641 leucine-rich repeat containing protein, putative
Length = 3477
Score = 75.8 bits (38), Expect = 1e-12
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 910 gctggagatcataattggtttggtttaggaagtagaatcattataacaagtagagataag 969
|||||||||| | ||||||||||| |||||||||||| || |||||||||||||||||
Sbjct: 1054 gctggagatccttgttggtttggttcaggaagtagaatttttgtaacaagtagagataag 1113
Query: 970 caagtgctta 979
||| ||||||
Sbjct: 1114 caactgctta 1123
>28490.m000028 transferrin, putative
Length = 1794
Score = 71.9 bits (36), Expect = 2e-11
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 930 tggtttaggaagtagaatcattataacaagtagagataagcaagtgct 977
||||||||||| |||||| ||| |||||||||||||||||||||||||
Sbjct: 1188 tggtttaggaactagaattattgtaacaagtagagataagcaagtgct 1235
Score = 54.0 bits (27), Expect = 4e-06
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 623 tttggggaatgggtggtattggcaaaaccaccattgctagagctctgtttgatcaaatct 682
||||||| |||| ||| ||||||||||| ||||||||| ||||| | |||||| |||||
Sbjct: 971 tttggggcatggctggcattggcaaaacaaccattgctggagctatatttgatagaatct 1030
Query: 683 ctaatgattttgaag 697
|| ||| |||||||
Sbjct: 1031 ctgctgaatttgaag 1045
>29838.m001649 phosphoprotein phosphatase
Length = 2517
Score = 65.9 bits (33), Expect = 1e-09
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 614 ttttaggaatttggggaatgggtggtattggcaaaaccaccattgctag 662
|||||||||| |||||||||||||||||||| ||||| || ||||||||
Sbjct: 632 ttttaggaatatggggaatgggtggtattggaaaaacaactattgctag 680
>30190.m011052 leucine-rich repeat-containing protein, putative
Length = 3414
Score = 65.9 bits (33), Expect = 1e-09
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 923 attggtttggtttaggaagtagaatcattataacaagtagagataagcaagtgctta 979
||||||||||| |||||||||||| ||| |||||||||||||||| ||||| ||||
Sbjct: 935 attggtttggtccaggaagtagaattattgtaacaagtagagataaacaagtactta 991
>29757.m000716 hypothetical protein
Length = 1167
Score = 63.9 bits (32), Expect = 4e-09
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 935 taggaagtagaatcattataacaagtagagataagcaagtgcttatgaataaagctgata 994
|||| |||||||| ||||||||| || ||| |||||||| || | |||| || ||||
Sbjct: 26 taggtagtagaattattataacatctaaagacaagcaagttctaaagaatgtagttgatg 85
Query: 995 aaatatatgaggttaagggattgaatcactatgaagctcttcaattacttagtttgaagg 1054
| |||||||| ||| ||||||||||| | |||||||||||||| | | |||||||| |
Sbjct: 86 atatatatgaagttgagggattgaatgatgatgaagctcttcaactgttcagtttgaatg 145
Query: 1055 cttttaag 1062
||||||||
Sbjct: 146 cttttaag 153
>29910.m000950 TMV resistance protein N, putative
Length = 3276
Score = 61.9 bits (31), Expect = 2e-08
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1276 aaggatatatttcttgacattgcatgttttttcaaagga 1314
||||||||||||||||||||||||||||| || ||||||
Sbjct: 1306 aaggatatatttcttgacattgcatgtttctttaaagga 1344
>30074.m001357 TMV resistance protein N, putative
Length = 3057
Score = 61.9 bits (31), Expect = 2e-08
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 1430 tgcatgatttgctacaagaaatgggtcaggatattgttcggcaagaatcaaataaaaagc 1489
||||||||||||| | |||||||||||| || ||||| |||||||| || || |||
Sbjct: 1451 tgcatgatttgctgcgagaaatgggtcatgaaattgtatatcaagaatcgaaggaagagc 1510
Query: 1490 ctggagaacgtagcaggttatggattcctga 1520
||||| ||||||| ||||| |||||||||||
Sbjct: 1511 ctggaaaacgtagtaggttgtggattcctga 1541
>30099.m001682 hypothetical protein
Length = 1548
Score = 60.0 bits (30), Expect = 6e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 617 taggaatttggggaatgggtggtattggcaaaac 650
||||||||||||||||||| ||||||||||||||
Sbjct: 473 taggaatttggggaatgggcggtattggcaaaac 506
>30074.m001350 TMV resistance protein N, putative
Length = 2631
Score = 58.0 bits (29), Expect = 2e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1419 caagttagatatgcatgatttgctacaagaaatgggt 1455
||||||||| |||||||||||||||||||||| ||||
Sbjct: 1434 caagttagagatgcatgatttgctacaagaaacgggt 1470
>29910.m000957 TMV resistance protein N, putative
Length = 2835
Score = 56.0 bits (28), Expect = 9e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 910 gctggagatcataattggtttggtttaggaagtagaatcattataacaagtagagataag 969
|||||||| |||||||||||||| |||||||||||||||| |||| ||||||||||
Sbjct: 928 gctggagagcataattggtttggaccaggaagtagaatcattctaacttctagagataag 987
>29757.m000712 leucine-rich repeat-containing protein, putative
Length = 3255
Score = 54.0 bits (27), Expect = 4e-06
Identities = 108/135 (80%)
Strand = Plus / Plus
Query: 928 tttggtttaggaagtagaatcattataacaagtagagataagcaagtgcttatgaataaa 987
|||||||| ||||||||| | || ||||| ||||||||||||||| |||| ||||
Sbjct: 931 tttggtttgggaagtagagttcttgtaacatctagagataagcaagtacttaagaatgtt 990
Query: 988 gctgataaaatatatgaggttaagggattgaatcactatgaagctcttcaattacttagt 1047
| |||| |||||||||| ||| ||||||| | | | ||||||||||||| ||| | | |
Sbjct: 991 gttgatgaaatatatgaagttgagggattaagtgatgatgaagctcttcagttattcaat 1050
Query: 1048 ttgaaggcttttaag 1062
||| | |||||||||
Sbjct: 1051 ttgcatgcttttaag 1065
>28525.m000274 TMV resistance protein N, putative
Length = 3351
Score = 54.0 bits (27), Expect = 4e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1429 atgcatgatttgctacaagaaatgggtcaggatattgttcggcaagaatca 1479
||||||||||| || ||||||||||||| || |||||||| |||||||||
Sbjct: 1453 atgcatgatttacttcaagaaatgggtcgagaaattgttcgacaagaatca 1503
>29801.m003132 Disease resistance protein RPS2, putative
Length = 3033
Score = 54.0 bits (27), Expect = 4e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 928 tttggtttaggaagtagaatcattataacaagtagagataagcaagt 974
||||||| ||||||| |||| || ||||||||||| |||||||||||
Sbjct: 877 tttggttcaggaagtcgaattatcataacaagtagggataagcaagt 923
>29801.m003134 leucine-rich repeat-containing protein, putative
Length = 3285
Score = 54.0 bits (27), Expect = 4e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 928 tttggtttaggaagtagaatcattataacaagtagagataagcaagt 974
||||||| ||||||| |||| || ||||||||||| |||||||||||
Sbjct: 973 tttggttcaggaagtcgaattatcataacaagtagggataagcaagt 1019
>29929.m004540 ATP binding protein, putative
Length = 3294
Score = 54.0 bits (27), Expect = 4e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1429 atgcatgatttgctacaagaaatgggtcaggatattgttcggcaagaatca 1479
||||||||||| || |||||| |||||| ||||||||||||| |||||||
Sbjct: 1456 atgcatgatttacttcaagaattgggtcgagatattgttcggcgagaatca 1506