Jatropha Genome Database
- JcCA0315581.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0315581.20 - phase: 0
(813 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29908.m006173 conserved hypothetical protein 515 e-145
>29908.m006173 conserved hypothetical protein
Length = 810
Score = 515 bits (260), Expect = e-145
Identities = 557/656 (84%)
Strand = Plus / Plus
Query: 136 tcaatagacgaagaattggagtccttgagatccgagaatcgttgtctaaaattgcagctc 195
||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||
Sbjct: 133 tcaatagacgaggaattggagtcattaagatcagagaaccggcgtctaaaaaaccagctt 192
Query: 196 gagcaaaatttgaaacttcttcaaaatttatctgaatctccttgcttgttaaacgattgc 255
|| || |||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 193 gaacagaatttgaagcttcttcaaaatttatctgaatcttcttgcttgttaaacgattgc 252
Query: 256 cctcctgatctacatgcccgcctagttgctactgtggattctgaagacttcttggctcga 315
|||||||||||| | |||| |||||||||||||| || |||||| ||||| ||| ||
Sbjct: 253 cctcctgatctatacacccgtctagttgctactgttgactctgaaaacttcatggagcgt 312
Query: 316 cttaaatcccttcaactggcttcagccaacataagtggcattgaattccctttcaaggag 375
|||||||||||||| | || |||||||||| || | |||||||||||||||||||||||
Sbjct: 313 cttaaatcccttcagcaagcatcagccaacaaaactagcattgaattccctttcaaggag 372
Query: 376 gctacaggagatgatatgcattctgctgaaatgctaattaatgtttctaacgaggaacct 435
|| |||| |||| || |||||||||||||| ||||||||||||| | |||||||||
Sbjct: 373 ccttcagggaatgacattcattctgctgaaattttaattaatgtttcccatgaggaacct 432
Query: 436 agttggtgggtttgggtcacagaagaaatggctcccaacaatattgaagaacggagtaga 495
|| |||||||| ||||| ||||| ||||||| ||||| |||| | |||||||| ||| ||
Sbjct: 433 agctggtgggtgtgggtaacagatgaaatggttcccagcaatgtcgaagaacgaagtgga 492
Query: 496 attgacaatgaaaactatgtagttgttactgaggaacatgtggtggatgcagttgccaat 555
||||| ||||||| ||||| || ||||||||||||||||||||||| | ||||||||
Sbjct: 493 attgatgatgaaaattatgttgtggttactgaggaacatgtggtggagggggttgccaac 552
Query: 556 tttatggctaaatgcattctatcaaatcctaaggctcagaaaatgactccagaggagctg 615
|||||||||||||||||||| ||||| || ||||||||| | ||| | ||||| |||||
Sbjct: 553 tttatggctaaatgcattctgtcaaacccaaaggctcaggacatggcaccagaagagcta 612
Query: 616 cagaagtccctggaaaaagcattggaaggtgtgagcaaatgggagaagatattaaatatt 675
|||||| || | |||||||||||||||||||||||||| ||||||| || || |||||
Sbjct: 613 cagaagattctcgcaaaagcattggaaggtgtgagcaaattggagaaggtactagatatt 672
Query: 676 tggcatgcaggacagctattttacactctggctacctggggacttgccctgtgggggctg 735
|||||||||||||| | ||||| || || ||||| ||||||||||| || |||||| ||
Sbjct: 673 tggcatgcaggacaattgttttatacccttgctacttggggacttgcgctatgggggttg 732
Query: 736 tatcggactcgatctattctgaaacttgctgcaaagggcgttcacaaaaccagcaa 791
||||||| | || || | || |||||||||||||||||||| |||| |||||||||
Sbjct: 733 tatcggagtagagctgtactaaaacttgctgcaaagggcgtccacacaaccagcaa 788
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 gcaatagaggcggcgaagacggttatcgaggtagccgacgtcgcttggaaggccatggaa 75
|||||||||||||||||||| || ||||||||||| || || || ||||| |||||||||
Sbjct: 16 gcaatagaggcggcgaagacagtcatcgaggtagctgatgtggcatggaaagccatggaa 75
Query: 76 tttac 80
|||||
Sbjct: 76 tttac 80