Jatropha Genome Database

JcCA0315371.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0315371.20 - phase: 0 /partial
         (525 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29848.m004496 Protein ABC1, mitochondrial precursor, putative         208   2e-53

>29848.m004496 Protein ABC1, mitochondrial precursor, putative
          Length = 2199

 Score =  208 bits (105), Expect = 2e-53
 Identities = 303/369 (82%)
 Strand = Plus / Plus

                                                                        
Query: 6    agcaatatctgaacaggcttcagagtcaacgggagaggctgctaagtctgaagaaaatcc 65
            |||||||||||||||||||||||||||||| ||||||||| | |||||||||||| ||| 
Sbjct: 1665 agcaatatctgaacaggcttcagagtcaactggagaggctcccaagtctgaagaagatct 1724

                                                                        
Query: 66   ttcagacactctagaatggaaatcttttgatatccgtgctgttgttagtgccacagaaga 125
            | || |  || | | ||||||||| ||||| || ||  |||||||| |||| || |||||
Sbjct: 1725 tacaaatccttttggatggaaatcatttgacatgcgctctgttgttggtgcaactgaaga 1784

                                                                        
Query: 126  tcttttgctcttcattctatctgagaagggtagcagggtgcgtgttttccttgtacggga 185
            |||| ||||||||||||||||||| |||||| | ||||| |||||||||||| | |||||
Sbjct: 1785 tcttctgctcttcattctatctgaaaagggttggagggttcgtgttttccttatccggga 1844

                                                                        
Query: 186  tataattaaggtggctgatgtctttttacgagataaaatcgttggttgcattttagacca 245
            | | |||||||| | |||||  ||||||  |||| || | ||||||||||| |  ||  |
Sbjct: 1845 tttgattaaggtagttgatgcatttttagaagatgaagttgttggttgcatatctgatga 1904

                                                                        
Query: 246  gaaacgtgaaggaaacgaggcatctaagtctgagggccattcaacattcatgagggtagt 305
             |||   |||| ||  ||||||||||||  |||| | |||||||   |||||||||||||
Sbjct: 1905 aaaatacgaagcaagtgaggcatctaagagtgagagtcattcaatggtcatgagggtagt 1964

                                                                        
Query: 306  taatgggtttcaatatctacgtcaagcggtaaagttagccccagagttgtggactgcaat 365
            | ||||||| || ||||| |||||||| |||||||| ||||||||| ||||||| | |||
Sbjct: 1965 tgatgggttccagtatcttcgtcaagcagtaaagttggccccagagatgtggacagtaat 2024

                     
Query: 366  gcttatacg 374
            |||||||||
Sbjct: 2025 gcttatacg 2033