Jatropha Genome Database
- JcCA0314181.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0314181.10 - phase: 0 /partial
(1664 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29904.m002981 hypothetical protein 123 4e-27
>29904.m002981 hypothetical protein
Length = 2376
Score = 123 bits (62), Expect = 4e-27
Identities = 152/182 (83%)
Strand = Plus / Plus
Query: 602 catgtaatggttctggttccgcaataaatcatggaaaagaggttgacctcaatagtgttt 661
||||||||||||||| ||| || | ||||| ||||||| |||| |||| | || ||
Sbjct: 617 catgtaatggttctgattcagctctgaatcacggaaaaggaattgatctcactggtagtt 676
Query: 662 ctcaacctaaagtggaaaaacaaatgtctgcttctcatctcgctgttacctcaccaagag 721
||| || |||| | ||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 677 ctccacataaaattgaaaaacaagcatctgcttcccatctatctgttacctcaccaagag 736
Query: 722 taactgggcaaaaaagactggtgcgaaatgggtgtatttcaccacataatatagccagta 781
| |||||||| ||| |||||||||||||||| |||||||| |||||||||||||||| ||
Sbjct: 737 ttactgggcataaacgactggtgcgaaatggttgtatttctccacataatatagccacta 796
Query: 782 gg 783
||
Sbjct: 797 gg 798
Score = 121 bits (61), Expect = 1e-26
Identities = 293/369 (79%), Gaps = 6/369 (1%)
Strand = Plus / Plus
Query: 1207 tccagacatgtgtctgggcataatcaaacaagtcaaccacatcatattgggaatggacat 1266
||||| ||||||||||||| |||||||||| || ||| ||||||||||||||| ||||
Sbjct: 1249 tccaggcatgtgtctgggctcaatcaaacaaatcgaccgcatcatattgggaatatacat 1308
Query: 1267 actaaaaggcaaaagaaacgtgcattgactttaagaaatcacagtgaatgctcttcaatt 1326
|||||||| |||||||| || ||| |||| |||||| || | |||| ||| |||
Sbjct: 1309 actaaaagacaaaagaagtatggattaacttcgagaaatgacggggaatactccacaaca 1368
Query: 1327 gttcctgacgactcagaaatatttttccttggctcatctctggagtcatccagctcaaga 1386
|||||||| ||||||||||| | ||||||| |||||| |||||||| || || |||
Sbjct: 1369 gttcctgatgactcagaaattatgctccttggttcatctgatgagtcatctaggtccaga 1428
Query: 1387 tcatccagaacgttgaatagacaacatcagggcattttggatccgatatatgaaattgat 1446
||||||||||| | ||||||| | | ||||||||| |||| || |||||| |||||
Sbjct: 1429 tcatccagaacttcatatagacagcgtagaggcattttgcatccaatttatgaagttgat 1488
Query: 1447 gatgaatcgtttactgaaatgagaaatggcaactctcaggggttaggctctgtgaatgat 1506
|| || || |||| | |||| ||||| ||||||||| ||| | || | ||||||
Sbjct: 1489 gag---tcattacctgagagaagaactggcagctctcagggattaagttcggaaaatgat 1545
Query: 1507 ---gactcagatgcaagggcaagacaagtggaagcagatgagatgctagctcgtgaactc 1563
|| ||||||| |||||||||||||||||||| ||||||||| | ||||||||||||
Sbjct: 1546 attgaggcagatgctagggcaagacaagtggaagctgatgagatgttggctcgtgaactc 1605
Query: 1564 caagaacaa 1572
|||||||||
Sbjct: 1606 caagaacaa 1614
Score = 63.9 bits (32), Expect = 3e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1 atggaggagatggacattgaacaggtagtggatgtaccagatactcctgatagaat 56
||||| |||||||||| ||||||||||||||| | ||||| ||||||||||||||
Sbjct: 1 atggaagagatggacactgaacaggtagtggaaattccagacactcctgatagaat 56
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 897 tgaagagaataattgtcatagagctaaaggaaaagggttggta 939
||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 924 tgaagagaataatcattatagagctaaaggaaaagggttggta 966
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1029 cagagatgcattattaggtggttggagaagtacacgcaacc 1069
||||||||| | |||||||||||||||||||||||| ||||
Sbjct: 1068 cagagatgcgtcattaggtggttggagaagtacacggaacc 1108