Jatropha Genome Database

JcCA0314171.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0314171.10 + phase: 0 /pseudo/partial
         (3292 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30099.m001638 hypothetical protein                                    100   1e-19

>30099.m001638 hypothetical protein
          Length = 1032

 Score = 99.6 bits (50), Expect = 1e-19
 Identities = 134/162 (82%)
 Strand = Plus / Plus

                                                                        
Query: 2832 tccatcgaaaactgcagtaagttgatttctctttcctcaagcttggagcatttaacatct 2891
            ||||| || |||| |||||| ||||||||||| || |  || ||| || || | |||| |
Sbjct: 577  tccattgagaactccagtaatttgatttctctatcattgagtttgcagaatctcacatat 636

                                                                        
Query: 2892 cttgaacagttaaccattatgtattgtccaagtcttggttctttaccagaaggtctgcag 2951
            ||||| || || ||||| ||||||||||||||||||| |||||| ||| | ||| |||| 
Sbjct: 637  cttgagcacttgaccatcatgtattgtccaagtcttgtttctttgccaaagggtttgcat 696

                                                      
Query: 2952 cacctctctgctcttcgaagtttgactatgttaagttgtcct 2993
            ||||||||||||||||| ||||| |||||  |||||||||||
Sbjct: 697  cacctctctgctcttcgcagtttaactatcataagttgtcct 738