Jatropha Genome Database
- JcCA0314071.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0314071.10 - phase: 0
(1644 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014077 isochorismate synthase, putative 745 0.0
>30147.m014077 isochorismate synthase, putative
Length = 1671
Score = 745 bits (376), Expect = 0.0
Identities = 661/756 (87%)
Strand = Plus / Plus
Query: 433 ggtgtaggctctgcggtcctctttaggcatatccatccattctcctacaatgactggaag 492
|||||||||||||| ||||| |||| |||||||||||| |||||||||||||||||||||
Sbjct: 475 ggtgtaggctctgctgtcctttttacgcatatccatcctttctcctacaatgactggaag 534
Query: 493 tcgattaagaggtttttatccgctaaatgtcctttaattcgtgcttatggagcaatccgg 552
|| || |||||||| ||||| || ||||||||||| ||||||||||||| ||||| ||
Sbjct: 535 tccataaagaggttcttatcagccaaatgtcctttggttcgtgcttatggtgcaattcga 594
Query: 553 ttcgatgccagggctaacatatcatctgagtgggaggcttttggttcattttacttcatt 612
|| ||||| | |||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 595 tttgatgcaatggctaacatatcatctgagtgggaatcctttggttcattttacttcatt 654
Query: 613 gttcctcatgttgagtttgatgagtttgaaggaagttcgatgcttgctgctactattgcc 672
|||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 655 gttcctcaggttgagtttgatgagcttgaaggaagttcgatgcttgctgcaactattgct 714
Query: 673 tgggataatgccctctcttggacatgggggcaggccattgatgcacttcgacttaccatg 732
|||||||||||||| || |||||||||| || |||||||||||||||| ||||||||||
Sbjct: 715 tgggataatgccctttcatggacatgggaacaagccattgatgcacttcaacttaccatg 774
Query: 733 actcaggtttcttctgttattgtaaaattgcaaaaagaagtcgctgggacatttatatta 792
| |||| |||||||| |||||| ||| |||||| || | | ||||| || ||
Sbjct: 775 agtcagatttcttctaccgctgtaaagttgtgtaaagaattcagtagaacattcattttg 834
Query: 793 agtaataatcacattcccaataagacctactgggatcgtgcagtgaagagagctttgcag 852
| | ||||||| |||||| |||||| |||||||||| ||| ||||||||||||||||||
Sbjct: 835 aacattaatcactttcccagtaagacttactgggatcttgccgtgaagagagctttgcag 894
Query: 853 ataatcagtagaagcagctcaccactcattaaggttgtacttgcacgtagcagcaaagtt 912
||||| | |||||| |||||||| |||| |||||||||||||||||||| |||| ||||
Sbjct: 895 ataataaatagaagaagctcacctctcacaaaggttgtacttgcacgtagtagcagagtt 954
Query: 913 gtaactgctactgacattgatcctataacatggttggcttgtctacaggttgaaggagaa 972
|||||||||| ||||| ||||| ||||||||||| |||||| | ||||| ||||||||
Sbjct: 955 gtaactgctaacgacatcgatcccataacatggttagcttgtttgcaggtcgaaggagag 1014
Query: 973 aatgcttatcaattttgtcttcagccacctaattctccagcctttattgggaacacgcca 1032
|||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||
Sbjct: 1015 aatgcttatcaattttgtcttcagcctcctaatagtccagcatttattgggaacacgcca 1074
Query: 1033 gagcaactatttcacagaaaacggctagaagtaagtagtgaggcattggcaggaacccgt 1092
||||||||| ||||||||||| || ||| ||| |||||||||||| ||||||||||||||
Sbjct: 1075 gagcaactacttcacagaaaatggttaggagttagtagtgaggcactggcaggaacccgt 1134
Query: 1093 gctagaggcgaatcaaaggctctagatctccagatagaactcgatttactttccagccgt 1152
|| ||||||| |||||||||||||||||| || ||||| ||||||||||||||||| |
Sbjct: 1135 gccagaggcggatcaaaggctctagatcttcaaatagagctcgatttactttccagtccc 1194
Query: 1153 aaggaccatcttgagttcaccatagtacgagacagc 1188
||||||||||||||||| ||||||| |||||||||
Sbjct: 1195 aaggaccatcttgagtttgccatagtccgagacagc 1230
Score = 428 bits (216), Expect = e-119
Identities = 327/364 (89%)
Strand = Plus / Plus
Query: 1214 aaccaaatatagtaatacggaaattccccagagttcaacatttgtatgcccagttggcag 1273
|||| |||| || |||||| |||||| | ||||| |||||||||||||| |||||| |||
Sbjct: 1274 aaccgaataaagcaatacgaaaattctcaagagtccaacatttgtatgctcagttgtcag 1333
Query: 1274 gaaaattaagaagtgaagatgatgagtttgatatcctttcttctcttcacccaactccag 1333
||| |||||| |||||||| |||||||| || ||| | ||||||||||| |||||||| |
Sbjct: 1334 gaacattaaggagtgaagacgatgagttcgacatcttgtcttctcttcatccaactcctg 1393
Query: 1334 cagtttgtggatttccaacggaagaggcaagagtattaattgcagaaactgaagtttttg 1393
||||||||||||||||||| ||||||||| | | |||||||||||||||||||| ||||
Sbjct: 1394 cagtttgtggatttccaacagaagaggcacgccttttaattgcagaaactgaagtatttg 1453
Query: 1394 atcgagggatgtatgctgggcctgttggttggtttggaggaggagagagtgagtttgctg 1453
|| |||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 1454 atagaggaatgtatgctggtcctgttggctggtttggaggaggagagagtgagtttgctg 1513
Query: 1454 ttggcatcagatcagcattggtagaaaagggtcttggtgcaatgatctatgctgggactg 1513
|||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| |
Sbjct: 1514 ttggcatcaggtcagcattggtagaaaagggctttggtgcattgatctatgctgggacag 1573
Query: 1514 gaatagtagaaggaagcaatccatctttagaatgggatgaactagaactgaagacatctc 1573
| |||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 1574 ggatagtagagggaagcaatccatctttagaatgggctgaactggaactgaagacatctc 1633
Query: 1574 agtt 1577
||||
Sbjct: 1634 agtt 1637
Score = 147 bits (74), Expect = 2e-34
Identities = 146/170 (85%)
Strand = Plus / Plus
Query: 202 ctcaatttcgccatttctgatttgaaatccaatccaccacttttcacttcagggattata 261
|||||||| || ||||||||| | ||| | ||||| |||||||| |||||||||||||||
Sbjct: 241 ctcaattttgcaatttctgatattaaagctaatcctccacttttgacttcagggattata 300
Query: 262 cgtcttcaggtaccaattcaacagcgaattgaagcaattgattggctccatgctcaacat 321
||||| ||||||||||| |||||| ||||||||||||| | ||||||||||| || ||
Sbjct: 301 cgtctccaggtaccaatcaaacagcaaattgaagcaattcaatggctccatgcacagcac 360
Query: 322 catcttcttccacgctgcttcttctctggtagaagccgaaggaaagatga 371
| ||||||||||||||||||||||| || |||||| |||| || |||||
Sbjct: 361 gaccttcttccacgctgcttcttctcaggcagaagcagaagaaaggatga 410
Score = 65.9 bits (33), Expect = 7e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 1 atggctactgctgctgtagccagaaatttccttgcacgtttcatggatttagactccgcc 60
||||| |||||||||||||||| ||| ||||||||||||||||||||||| || ||
Sbjct: 1 atggcaactgctgctgtagccaagcattgtcttgcacgtttcatggatttagaatcagct 60
Query: 61 aaatgcagcatttctgctcaactaatttc 89
|||||||| |||||| |||| ||||||
Sbjct: 61 aaatgcagtctttctggccaaccaatttc 89