Jatropha Genome Database
- JcCA0313841.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0313841.20 + phase: 0
(1311 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m013942 pentatricopeptide repeat-containing protein, putative 527 e-149
>30147.m013942 pentatricopeptide repeat-containing protein, putative
Length = 1326
Score = 527 bits (266), Expect = e-149
Identities = 833/1022 (81%)
Strand = Plus / Plus
Query: 256 aaaatgggttttctctcaaacccatttgttgcttgcgctctcgtcgacatgtatggaaaa 315
||||||||||| || || ||||||||||| || |||||||||| || |||||||| |||
Sbjct: 271 aaaatgggtttcctttcgaacccatttgtggccagcgctctcgtggatatgtatggcaaa 330
Query: 316 tgcgtttccaccttttcagctcgtaaattattcgacgaaattcctcaaaggaatgtggtt 375
|||| | || ||| ||||| ||||| || || || |||||||||||||| ||||| |||
Sbjct: 331 tgcgcgtgcatcttctcagcgcgtaagttgtttgatgaaattcctcaaagaaatgttgtt 390
Query: 376 gtttggaatgcgatgatatcgctatatacgcattctaattgtgtttctgatgctttgtat 435
|| |||||||| ||||| || || || || ||||| ||| ||||| |||||||| ||
Sbjct: 391 gtgtggaatgctatgatttcactttacacacattcgaatcgtgttcgcgatgctttagat 450
Query: 436 atgtttgatgcaatgcatgttgcgcctgatgcgtccacttttaatgcaataattgcaggt 495
||||| ||||||||| | | | |||| ||| ||| |||||||||||| |||| |||
Sbjct: 451 atgttcgatgcaatggaaatcgagcctaatgtgtctacttttaatgcactaatatatggt 510
Query: 496 ctggccgggacggaggatgggtctgcgaaagccattgctttttattggcgaatgagggag 555
|| | || |||| ||||| || |||||||| ||||||||| |||||| ||
Sbjct: 511 ctatctggcgttaaggacgggtcgataaaggccattgccttttattggaaaatgagacag 570
Query: 556 ttgagtttgaagccaaatttaattacgcttcttgcactattgcgtgcttgtgtgcgcatg 615
||| || |||| |||||||||||||||||||| || | || | ||||||||| | ||
Sbjct: 571 ttgggtctgaaaccaaatttaattacgcttctcgctttgttacctgcttgtgtaggtata 630
Query: 616 acgtctttgaatatgattaaagaaattcatggatgctcaataagaaaccatatcgatcca 675
| |||||||| |||||| |||||| || |||| |||||||| || |||| ||||
Sbjct: 631 gcagctttgaatttgattagagaaatccacggatattcaataaggaatgatattgatcgg 690
Query: 676 catccccagttgagaagtggcttagtagaggcctatgggcgatgcggatgtcttattaat 735
|||||||| ||| |||||||| | |||| || ||||| | || ||||| |||||||||
Sbjct: 691 catccccaattgggaagtggccttctagatgcgtatggaaggtgtggatgccttattaat 750
Query: 736 gcaagtaatgtgttttataatatgaaggagcgggacgttgttgcatggagtagtttgata 795
|| ||||||||||||| | |||||| || |||| || |||||||||||||| ||||||
Sbjct: 751 gcgagtaatgtgttttgtggtatgaaagaaagggatgtagttgcatggagtagcttgata 810
Query: 796 tctgcatatgcacttcatggggaagcaagaagtgcacttgaaacatttcaccatatggaa 855
|| |||||||||||||| |||||||| | || ||||||||||| ||||| ||| ||||||
Sbjct: 811 tcagcatatgcacttcacggggaagccaaaaatgcacttgaaatatttcgccaaatggaa 870
Query: 856 atggcaaaagtgttgcctgatgacattacttttctagcagttttaaaagcttgtagccat 915
|||| ||||| ||||||||||||||| |||||||||||| | ||||||||||| |||
Sbjct: 871 ttggcgaaagttcagcctgatgacattacatttctagcagttctgaaagcttgtagtcat 930
Query: 916 gcaggattagctgacgacgcattggattacttcgccagaatgcaacaagattatggcttg 975
||||||||||||||||| ||||||||||||||| | | ||||||| | | ||| | ||
Sbjct: 931 gcaggattagctgacgaggcattggattacttcacaaaaatgcaagagggttacagactg 990
Query: 976 caaccaagcagtgaccattattcttgtttggttgatgttttgagcagagcagggaggttg 1035
||| || |||||| ||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 991 caagcagtcagtgatcattattcttgcttggttgatgttttgagtagagctgggaggtta 1050
Query: 1036 tatgaggcatatgatatcatacggggaatgccagtgaaggtgactgtgaaagcttggggt 1095
|||||||||||| | |||| | || |||||| ||||||||||||| |||||| ||||||
Sbjct: 1051 tatgaggcatataaggtcattcaggaaatgccggtgaaggtgactgcgaaagcctggggt 1110
Query: 1096 gccctccttggggcttgtcgaacttatggagaagttgaattggcggagattgcagggagg 1155
||||| |||||||| ||| |||||||||||||| | || ||||| ||||||| ||| ||
Sbjct: 1111 gcccttcttggggcatgtagaacttatggagaaatagagttggctgagattgtaggaaga 1170
Query: 1156 gctttgtttgagatagaacctgataatcctgccaactatgtcttattggctagaatttat 1215
||||||||||| |||||||||||||||||||| || ||||| || ||||||||||| |||
Sbjct: 1171 gctttgtttgaaatagaacctgataatcctgctaattatgtattgttggctagaatatat 1230
Query: 1216 gccagcatggggagacacggggaagctgagagaatgagaagagaaatgaaagagaaggga 1275
|| ||| | |||||| | | |||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 1231 gcgagcgtagggagatatgacgaagctcagagaataagaagagaaatgaaagagagggga 1290
Query: 1276 gt 1277
||
Sbjct: 1291 gt 1292