Jatropha Genome Database

JcCA0313601.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0313601.10 - phase: 1 /partial
         (374 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30146.m003501 hexokinase, putative                                    365   e-100

>30146.m003501 hexokinase, putative
          Length = 1485

 Score =  365 bits (184), Expect = e-100
 Identities = 319/364 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    ctgatctcaaagtggtggggaataaattgaaggatattttagagatatctaacacatccc 60
            ||||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||
Sbjct: 1109 ctgatcttaaagtggtggggaataaattgaaggatattttggagatatctaatacttccc 1168

                                                                        
Query: 61   tgaaaacaagaaaagttgttattgagctttgcaacattgttgcttcccgtggagcacaac 120
            ||||||| |||||||||||| ||||||||||||||||||||||  | || ||||| | ||
Sbjct: 1169 tgaaaactagaaaagttgttgttgagctttgcaacattgttgccacgcgcggagcgcgac 1228

                                                                        
Query: 121  ttgcagcagctggaatcttgagtatcctgaagaaaatggggaaggatacggtcaaagagg 180
            |||| ||||||||||||||| ||||| |||||||||||||||||||||| || |||||||
Sbjct: 1229 ttgcggcagctggaatcttgggtatcttgaagaaaatggggaaggatacagtgaaagagg 1288

                                                                        
Query: 181  gggataaacagaagacggtgatagccttggatggtggattgtatgagcattatagtgaat 240
            |||| | ||||||||| || |||||  ||||||| ||||| || ||||| || |||||||
Sbjct: 1289 gggacacacagaagaccgtaatagctatggatggaggattatacgagcactacagtgaat 1348

                                                                        
Query: 241  acagcaagtgcatggagaatactcttaatgaattacttggtgaagaagtgtccaaaaaca 300
            | |||||||||||||||||||| ||||| || || ||||| ||||| ||| |||||| ||
Sbjct: 1349 atagcaagtgcatggagaatacccttaacgagttgcttggagaagatgtgcccaaaagca 1408

                                                                        
Query: 301  tcgagattgtacattccaacgatggatctggcattggagcggctctccttgctgcctcac 360
            | || || || || ||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 1409 ttgaaatagtgcactccaacgatggatctgggattggagctgctctccttgctgcatcac 1468

                
Query: 361  attc 364
            ||||
Sbjct: 1469 attc 1472