Jatropha Genome Database
- JcCA0313461.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0313461.10 + phase: 0
(621 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29709.m001184 rac gtpase, putative 755 0.0
29602.m000209 rac gtpase, putative 105 3e-22
29646.m001113 rac gtpase, putative 100 2e-20
30170.m014385 rac gtpase, putative 74 1e-12
28962.m000460 rac gtpase, putative 68 7e-11
30147.m013989 rac gtpase, putative 62 4e-09
29900.m001556 rac gtpase, putative 60 2e-08
29912.m005491 rac gtpase, putative 58 7e-08
>29709.m001184 rac gtpase, putative
Length = 609
Score = 755 bits (381), Expect = 0.0
Identities = 536/587 (91%), Gaps = 3/587 (0%)
Strand = Plus / Plus
Query: 34 acaactaagtttatcaaatgtgtgacagttggagatggagcagttggaaagacctgcctt 93
|||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||
Sbjct: 25 acaactaagtttatcaaatgtgtgactgttggagatggagctgttggaaagacgtgtctt 84
Query: 94 cttatctcctacactagcaacaccttccccacagattatgttcctactgtttttgataac 153
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 85 cttatctcttacactagcaacaccttccctacagattatgttcctactgtttttgataac 144
Query: 154 ttcagtgccaatgttatggttgatgggaagactgtgaatctgggtctttgggacactgct 213
|||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 145 ttcagtgccaatgtcatggttgatggcaagactgtgaatctgggtctctgggacactgct 204
Query: 214 ggtcaagaggattacaacaggctaaggcccctaagttatagaggagcagacgttttcatt 273
||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 205 ggtcaggaggattacaacaggctaaggcctctaagttatagaggagctgatgttttcatt 264
Query: 274 cttgccttttctctcatcagtaggcctagctatgagaacatatcaaaaaagaagtgggtt 333
||||||||||| ||||| || |||||||||||||| ||||| |||||| || |||||
Sbjct: 265 cttgccttttcactcataagcaggcctagctatgaaaacatttcaaaa---aaatgggtc 321
Query: 334 ccagagctcagacattatgctccatcagttcccattattcttgtggggactaaactagat 393
|| ||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||
Sbjct: 322 ccggagctcagacattatgccccgtcagtacccattattctggtggggactaaactagat 381
Query: 394 ctaagggaagagggacaatttcacttagattatcctggggcatgcaccatttctacagag 453
|| |||||||| |||||||||||| | ||||||||||| |||||||||||||| | ||||
Sbjct: 382 ctgagggaagatggacaatttcacctggattatcctggagcatgcaccatttcaagagag 441
Query: 454 cagggtgtagagctaaagaagcaaataggagcactggcatatgtagaatgcagctctaag 513
||||| |||| || |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 442 cagggcatagaactcaagaagcaaataggagcattggcatatgtagaatgcagctctaaa 501
Query: 514 acacagcagaatgtcaagacagtctttgatgccgctatcaaggcagttctccaacctcca 573
|||||||||||||| ||| | || |||||||| || ||||||||||||||||||||||||
Sbjct: 502 acacagcagaatgtgaaggccgtgtttgatgctgcaatcaaggcagttctccaacctcca 561
Query: 574 aagacgaagaagcaaaagagaaaacacagtgtctgccatattcttta 620
||||| ||||||||||| |||||||| || |||||||||||||||||
Sbjct: 562 aagaccaagaagcaaaaaagaaaacaaagggtctgccatattcttta 608
>29602.m000209 rac gtpase, putative
Length = 597
Score = 105 bits (53), Expect = 3e-22
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 94 cttatctcctacactagcaacaccttccccacagattatgttcctactgtttttgataac 153
|||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 67 cttatctcctacaccagcaacactttccccactgattatgttcctactgtatttgacaat 126
Query: 154 ttcagtgccaatgttatggttgatgggaagactgtgaatctgggtctttgggacactgct 213
||||||||||||||| | || ||||||| || || ||||| || || ||||| |||||
Sbjct: 127 ttcagtgccaatgttgttgtggatgggagcacagtcaatctagggctatgggatactgca 186
Query: 214 ggtcaagaggattacaa 230
|| || || ||||||||
Sbjct: 187 ggccaggaagattacaa 203
>29646.m001113 rac gtpase, putative
Length = 594
Score = 99.6 bits (50), Expect = 2e-20
Identities = 107/126 (84%)
Strand = Plus / Plus
Query: 42 gtttatcaaatgtgtgacagttggagatggagcagttggaaagacctgccttcttatctc 101
||||||||| ||||| || ||||| |||||||| ||||||||||| ||| | || || ||
Sbjct: 15 gtttatcaagtgtgtaactgttggtgatggagcggttggaaagacatgcatgctcatttc 74
Query: 102 ctacactagcaacaccttccccacagattatgttcctactgtttttgataacttcagtgc 161
||||| ||||| ||||||||||| ||||| |||||||| || ||||| |||||||||||
Sbjct: 75 ttacacgagcaataccttccccactgattacgttcctacggtgtttgacaacttcagtgc 134
Query: 162 caatgt 167
|||||
Sbjct: 135 taatgt 140
>30170.m014385 rac gtpase, putative
Length = 594
Score = 73.8 bits (37), Expect = 1e-12
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 94 cttatctcctacactagcaacaccttccccacagattatgttcctactgtttttgataac 153
||||| || |||||||||||||| ||||| || || ||||| || ||||||||||| ||
Sbjct: 67 cttatttcttacactagcaacactttccctacggactatgtaccaactgtttttgacaat 126
Query: 154 ttcagtgccaatgttatggttgatgggaagactgtgaatctgggtctttgggacactgct 213
|||||||| ||||| | || ||||||| ||||| ||| |||| | ||||| ||||||
Sbjct: 127 ttcagtgcaaatgtggttgtggatgggagcactgtcaatttgggattatgggatactgct 186
Query: 214 ggtcaagaggattacaa 230
|| || |||||||||||
Sbjct: 187 ggccaggaggattacaa 203
>28962.m000460 rac gtpase, putative
Length = 594
Score = 67.9 bits (34), Expect = 7e-11
Identities = 103/126 (81%)
Strand = Plus / Plus
Query: 42 gtttatcaaatgtgtgacagttggagatggagcagttggaaagacctgccttcttatctc 101
||||||||| || || || ||||| ||||| || ||||| || || |||||| | || ||
Sbjct: 15 gtttatcaagtgcgtcacggttggtgatggtgccgttggtaaaacttgccttttgatttc 74
Query: 102 ctacactagcaacaccttccccacagattatgttcctactgtttttgataacttcagtgc 161
||||| |||||||||||||| || |||||||| || |||||||| || || ||||||||
Sbjct: 75 ttacaccagcaacaccttccctacggattatgtgccaactgttttcgacaatttcagtgc 134
Query: 162 caatgt 167
|||||
Sbjct: 135 aaatgt 140
>30147.m013989 rac gtpase, putative
Length = 636
Score = 61.9 bits (31), Expect = 4e-09
Identities = 100/123 (81%)
Strand = Plus / Plus
Query: 46 atcaaatgtgtgacagttggagatggagcagttggaaagacctgccttcttatctcctac 105
||||| ||||||||||| |||||||| || || || || |||||| | ||||| | ||||
Sbjct: 25 atcaagtgtgtgacagtaggagatggtgctgtaggcaaaacctgcatgcttatttgctac 84
Query: 106 actagcaacaccttccccacagattatgttcctactgtttttgataacttcagtgccaat 165
||||| |||| || || || |||||| | || ||||| ||||| ||||||||||| |||
Sbjct: 85 actagtaacaagtttcctactgattatatacccactgtgtttgacaacttcagtgcaaat 144
Query: 166 gtt 168
|||
Sbjct: 145 gtt 147
>29900.m001556 rac gtpase, putative
Length = 594
Score = 60.0 bits (30), Expect = 2e-08
Identities = 126/158 (79%)
Strand = Plus / Plus
Query: 103 tacactagcaacaccttccccacagattatgttcctactgtttttgataacttcagtgcc 162
||||||||||| || || || || ||||||||||| || || ||||| || || |||||
Sbjct: 76 tacactagcaatacttttcctacggattatgttcccacagtatttgacaattttagtgct 135
Query: 163 aatgttatggttgatgggaagactgtgaatctgggtctttgggacactgctggtcaagag 222
||||| |||| ||||| | || |||||||| || | |||||||| ||||| || ||
Sbjct: 136 aatgtggtggtagatggtagtacagtgaatcttggattatgggacacggctgggcaggaa 195
Query: 223 gattacaacaggctaaggcccctaagttatagaggagc 260
||||| |||||||| ||||| || ||||| ||||||||
Sbjct: 196 gattataacaggctgaggccactgagttacagaggagc 233
>29912.m005491 rac gtpase, putative
Length = 630
Score = 58.0 bits (29), Expect = 7e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 490 gcatatgtagaatgcagctctaagacacagcagaatgtcaagacagtctttgatgccgct 549
|||||| | ||||| ||||||||||| |||||||||||||| | || |||||| | ||
Sbjct: 460 gcatatattgaatgtagctctaagactcagcagaatgtcaaagctgtttttgatactgca 519
Query: 550 atcaaggcagttctccaacctccaa 574
||||||| ||||| ||||||||||
Sbjct: 520 atcaaggttgttcttcaacctccaa 544