Jatropha Genome Database
- JcCA0313321.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0313321.10 + phase: 0
(1302 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m009134 hypothetical protein 478 e-134
30138.m004008 hypothetical protein 64 2e-09
>30174.m009134 hypothetical protein
Length = 1560
Score = 478 bits (241), Expect = e-134
Identities = 564/672 (83%), Gaps = 36/672 (5%)
Strand = Plus / Plus
Query: 207 ttatcgtcttagagaaaatcccagaaagactagaaggtttatggctgattcaagcaatag 266
|||| ||||||||||||| |||| || |||| ||||||||||||||||||||||| |
Sbjct: 240 ttatggtcttagagaaaaccccaagaaaactaagaggtttatggctgattcaagcaaggg 299
Query: 267 tcattttttgcaagaaaaagtctgtaaagcatgtggtaaaggttttcaatcgttgaaagc 326
| |||| ||||||| ||||| || || | |||||| ||||| |||||||||||||||||
Sbjct: 300 taatttgctgcaagagaaagtatgcaaggaatgtggaaaagggtttcaatcgttgaaagc 359
Query: 327 tctttgtggtcatatggcttgtcattcgaagaacagctttgaagatcagtcagagactac 386
||||||||| |||||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct: 360 tctttgtgggcatatggcttgtcactccaagaacagctttgaagatcaatcagagactac 419
Query: 387 tgagaggctgaaagatcaagtttttgatagccaatcagatactgaga---catcagctcc 443
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 420 tgagaagctgaaagatcaagtttttgatagccaatcagatactgagacgtcatcagctcc 479
Query: 444 aagtaagagaaggagatctagaagaatgaggtataagactattggtgtttattcttcttc 503
|||||||||||||||||| | |||||||||||| ||| ||||||||||||| ||||||||
Sbjct: 480 aagtaagagaaggagatccaaaagaatgaggtacaaggctattggtgtttactcttcttc 539
Query: 504 cttatc------------------ttctgctgcttctgatttagagcaagagcaagaaga 545
|| || ||| ||||||||||| | |||||||||||||||||
Sbjct: 540 gttgtcattagtaaatggttcgttatcttctgcttctgatgttgagcaagagcaagaaga 599
Query: 546 ggtagctatgtgtttgatgatgctgtctaaagattctggttttaaagggtgttttagttc 605
|||||||| ||||||||||||| ||||||| || |||||||||||||| |||||||||||
Sbjct: 600 ggtagctaagtgtttgatgatgttgtctaaggactctggttttaaaggttgttttagttc 659
Query: 606 gattgctgattcttcagataacaattctgtggttttagagactaaatcatcatcatcgcc 665
|||| ||||| |||||| |||||||| ||||| |||||||| ||||||||| ||
Sbjct: 660 agttgcagattcctcagat---aattctgttgttttggagactaa---atcatcatctcc 713
Query: 666 tgaattgaaaattggtataaagaaaaatggtgttaattgtgtatataacaatggtaatgc 725
| |||||| |||| || ||||| || || |||| |||||| ||| ||||||||||
Sbjct: 714 taaattgagaattagtgtaaag---aacggcgttagttgtgtgtat---aatggtaatgg 767
Query: 726 ggttttggagatgaagaaagcaaagaaac---aagttatgtccactgaaaatgatcaatc 782
| |||||||||| |||||||||||| | | ||||||||||| || |||||| | ||
Sbjct: 768 gattttggagataaagaaagcaaagcagcacgaagttatgtccgttggaaatgagtactc 827
Query: 783 tgagaattctgattctgggtattttagaaatgggcctaaaaaggttgaatctgaaatttc 842
|||||||||||||||||| ||||||| ||||| |||||||||||||||||||| |||||
Sbjct: 828 tgagaattctgattctggctattttaagaatggacctaaaaaggttgaatctgatatttc 887
Query: 843 agttcatgggtt 854
|||||||||||
Sbjct: 888 tgttcatgggtt 899
Score = 91.7 bits (46), Expect = 1e-17
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 1 atggaaccaaatcaaaagaaaaagttgttcatttgtaagttttgcaataagagataccca 60
|||||||||||| ||| || || ||||||||||||||||| ||||| ||||| |||||
Sbjct: 1 atggaaccaaatgcaaaaaagaaattgttcatttgtaagttctgcaacaagaggtaccct 60
Query: 61 tgtggcaagtctttaggaggtcatattaggatccatttgaatggtaatgg 110
|| |||||||| | ||||||||||| |||||||| |||||||| |||||
Sbjct: 61 tgcggcaagtcactgggaggtcatatcaggatccacttgaatgggaatgg 110
>30138.m004008 hypothetical protein
Length = 1674
Score = 63.9 bits (32), Expect = 2e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 532 caagagcaagaagaggtagctatgtgtttgatgatgctgtctaaagat 579
||||| ||||||||||| |||||||||||||||||||| |||| ||||
Sbjct: 646 caagaacaagaagaggttgctatgtgtttgatgatgctttctagagat 693