Jatropha Genome Database

JcCA0312871.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0312871.20 + phase: 0 
         (573 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m002112 phenazine biosynthesis protein, putative                309   1e-83

>29647.m002112 phenazine biosynthesis protein, putative
          Length = 1470

 Score =  309 bits (156), Expect = 1e-83
 Identities = 291/336 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaactactgaggttttgcagctcatagaagaaggtcttgtgtcatctcgtcttctt 60
           ||||||||| |||||||| |||||||||| ||||| ||| ||||  | |||| | | |||
Sbjct: 1   atggcaactcctgaggttctgcagctcattgaagagggtattgttacttctcctatgctt 60

                                                                       
Query: 61  gatcctacaaaagctgacactgcaaagtcccgaggcctgtcaattgagaagaagattgag 120
           |||| | |||||||||| ||||| ||||| |||||  |||||||||||||||| ||||||
Sbjct: 61  gatcatccaaaagctgaaactgcgaagtcgcgaggtttgtcaattgagaagaaaattgag 120

                                                                       
Query: 121 ttccttgagagcttgactggcaaagtcagcaacagaagatctcggagatggataaacgac 180
           ||||||||||||||||||| |||||| || ||||| |||||||| ||||||||||| || 
Sbjct: 121 ttccttgagagcttgactgccaaagtgagtaacaggagatctcgtagatggataaatgat 180

                                                                       
Query: 181 cgcttgttgatggaacttgttcctcgcttaaatgcagaagaaattagaggcttgtttgct 240
           || || || ||||||||||||||||| || ||||| || |||||||||||||||||||| 
Sbjct: 181 cgtttattaatggaacttgttcctcgtttgaatgctgatgaaattagaggcttgtttgcc 240

                                                                       
Query: 241 ccaccaccttggggcgatgatgtacccctgtcaccattttgcatgactaatgtgggagag 300
           |||||||| ||||| ||||||||||| |  ||| |||||| |||||||||||||||||||
Sbjct: 241 ccaccaccatggggtgatgatgtaccaccatcagcattttccatgactaatgtgggagag 300

                                               
Query: 301 tgggagaaatttaggaatatagacatggacaaacag 336
           |||||  | |||||||||||||| ||||||||||||
Sbjct: 301 tgggaatactttaggaatatagatatggacaaacag 336



 Score =  226 bits (114), Expect = 1e-58
 Identities = 198/226 (87%)
 Strand = Plus / Plus

                                                                       
Query: 335 agaggaggggtcgtgtggatgctgataaggtggctgtcttaaatgcgtggcgtagaatag 394
           |||||||||||||| | ||||  |||||||||||||| |||||||| ||||| |||||||
Sbjct: 374 agaggaggggtcgtattgatgaagataaggtggctgttttaaatgcatggcgcagaatag 433

                                                                       
Query: 395 atagccgaacgagagaagcacttcgccgtagctttcttacagatcttattgagggctatg 454
           || ||||||| ||||| || ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 434 attgccgaacaagagaggctcttcgtcgtagctttcttacagatcttattgatggctatg 493

                                                                       
Query: 455 aggcatgcataaggaccttcattcaggagagtggagatgaggaagttctcgcattacagg 514
           || | |||||| || ||||||||||||| || | |||||| || ||||| ||| |||| |
Sbjct: 494 agacttgcatacgggccttcattcaggaaagcgaagatgaagacgttcttgcactacaag 553

                                                         
Query: 515 ttcaagatccctttcatagattgttgctgcatggagtttgtgaggt 560
           |||||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 554 ttcaagatccttttcatagattgttgcttcatggtgtttgtgaggt 599