Jatropha Genome Database

JcCA0312681.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0312681.20 - phase: 0 
         (726 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30078.m002345 conserved hypothetical protein                          462   e-129

>30078.m002345 conserved hypothetical protein
          Length = 726

 Score =  462 bits (233), Expect = e-129
 Identities = 404/461 (87%)
 Strand = Plus / Plus

                                                                       
Query: 91  ccatcaggcccgacgaacataacagcgatcctcgaaaaagctggtcagtttacaaccttt 150
           |||||||| || || ||||| ||||| ||||||||||||||||| |||||||||||||||
Sbjct: 94  ccatcaggtccaaccaacatcacagccatcctcgaaaaagctggccagtttacaaccttt 153

                                                                       
Query: 151 attaagctaatgaaaagcacccaagaagctgaccaaataaacacacaactcaacaattca 210
           |||||||||||||  |||||||||||||||   ||||| ||||||||||| |||||||||
Sbjct: 154 attaagctaatgatgagcacccaagaagctagtcaaatcaacacacaacttaacaattca 213

                                                                       
Query: 211 aaccaaggcctgacggtgtttgcaccacctgataatgccttcgctaatcttaaaccaggc 270
           || ||||| || || || ||||||||||| ||||||||||| ||||| |||||| |||||
Sbjct: 214 aatcaaggacttacagtatttgcaccaccagataatgcctttgctaaccttaaagcaggc 273

                                                                       
Query: 271 acattaaactctctcaccgatcaaggaaaggtccagttagtgcaatttcacattctacct 330
           |||||||| || ||||| ||||||| ||| ||||||||  ||||||||||||| || |||
Sbjct: 274 acattaaattccctcactgatcaagaaaaagtccagttgatgcaatttcacatccttcct 333

                                                                       
Query: 331 agttttattgcaatgtcacaattccaaactgttagcaatcccttgcgtacacaggctggg 390
           | ||| ||| | ||||| || ||||||||||| || ||||| |||||||||||||| || 
Sbjct: 334 actttcatttccatgtctcagttccaaactgtgagtaatcctttgcgtacacaggcaggt 393

                                                                       
Query: 391 aatagcgcaaatggcgagttcccattaaatgtaacaacatcaggaaaccaagtgaatgta 450
           || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 394 aacagcgccaatggcgagttcccattaaatgtgacaacatcaggaaaccaagtgaatgta 453

                                                                       
Query: 451 actacaggtgttgatactgcaactgtggccaacactatatataccgatggctcgttagct 510
           || |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 454 acaacaggtgttgatactgcaactgtggctaacactatatatactgatggctcattagct 513

                                                    
Query: 511 gtttatcaggtagatcaagttcttcttccgttagacctttt 551
           || |||||||| ||  | || ||||||||  ||||||||||
Sbjct: 514 gtgtatcaggttgacaaggtacttcttccactagacctttt 554