Jatropha Genome Database

JcCA0312671.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0312671.10 + phase: 1 /pseudo/partial
         (1042 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30064.m000498 dihydrolipoamide succinyltransferase component of ...   184   7e-46

>30064.m000498 dihydrolipoamide succinyltransferase component of
           2-oxoglutarate dehydrogenase, putative
          Length = 1410

 Score =  184 bits (93), Expect = 7e-46
 Identities = 213/253 (84%)
 Strand = Plus / Plus

                                                                       
Query: 226 cattttcttcagacagtggagatctagttgatgctgttgtccctttcatgggcgaatcca 285
           |||||||||| || ||||| ||| | |||||||||||||||||||| ||||| |||||||
Sbjct: 263 cattttcttcggatagtggggatttggttgatgctgttgtcccttttatgggtgaatcca 322

                                                                       
Query: 286 ttactgatggcaccttggcaaaattcttgaagaaacctggtgatagagttgaagttgatg 345
           | || ||||| || |||||||||||| | ||||| |||||||||||||| ||||||||||
Sbjct: 323 taacagatggaactttggcaaaattccttaagaatcctggtgatagagtagaagttgatg 382

                                                                       
Query: 346 agcccattgctcagattgaaactgacaaggtgaccattgatgtagctagtcctgaagctg 405
           |||| |||||||| ||||| || || |||||||| |||||||| || ||||||||||| |
Sbjct: 383 agccaattgctcaaattgagacagataaggtgacaattgatgtggccagtcctgaagcag 442

                                                                       
Query: 406 gcactattcaaaagttagtagcaaaggaaggtgagacggtggaaccaggtaccaagattg 465
           |    ||| || |||| || || |||||||| ||||| |||||||| ||||||||  |||
Sbjct: 443 gtgtaattaaagagtttgtggccaaggaaggggagactgtggaacctggtaccaaagttg 502

                        
Query: 466 ctgtcatttcaaa 478
           || | ||||||||
Sbjct: 503 ctattatttcaaa 515



 Score =  123 bits (62), Expect = 2e-27
 Identities = 179/218 (82%)
 Strand = Plus / Plus

                                                                        
Query: 800  ctccgttctgattataaggatgcatttgtcgaaaaacatggagtgaaattgggatttatg 859
            ||||| ||||| ||||||||||| ||||| |||||||||||||| || |||||  |||||
Sbjct: 838  ctccgatctgagtataaggatgcttttgttgaaaaacatggagttaagttgggccttatg 897

                                                                        
Query: 860  tctggatttgtcaaagctgcagttagtgcacttcaataccagcctgttgtaaatgctgtc 919
            || |||||| | || ||||| || |||| ||| ||  | || ||| || ||||||| || 
Sbjct: 898  tcaggatttataaaggctgccgtaagtggactccagaatcaacctattataaatgcagtt 957

                                                                        
Query: 920  attgatggagatgatatcatatacagagactacattgatattagcattgctgttggcact 979
            || ||||| ||||||||||| || ||||| || || || || || |||||||||||||||
Sbjct: 958  atagatggggatgatatcatttatagagattatatagacatcagtattgctgttggcact 1017

                                                  
Query: 980  ccaaagggacttgttgttccagttatccgtaatgctga 1017
            |||||||| ||||| ||||| ||||| || ||||||||
Sbjct: 1018 ccaaagggccttgtcgttcctgttattcgcaatgctga 1055