Jatropha Genome Database
- JcCA0312651.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0312651.10 + phase: 0 /partial
(1071 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006438 conserved hypothetical protein 347 9e-95
>30169.m006438 conserved hypothetical protein
Length = 1584
Score = 347 bits (175), Expect = 9e-95
Identities = 592/733 (80%), Gaps = 9/733 (1%)
Strand = Plus / Plus
Query: 1 atggttttggaagaagagatcattgaattggctgaaaaactagagaaattgcagagaagg 60
|||||||| || |||||||| || |||||| ||||||||||||||| ||||||||||
Sbjct: 481 atggttttagaggaagagataatcaaattggttgaaaaactagagaagctgcagagaagt 540
Query: 61 tcaaggc------ataagtgtatagaggttcgaaattgtggcaattttgataaacaagcc 114
||||| ||||| | |||| |||||||| ||| |||||||||||| ||||||
Sbjct: 541 tcaagatcaagaaataaggatttagaagttcgaaaatgtagcaattttgatagacaagca 600
Query: 115 catcttcttcaaagacggctagagaagtttgcaggagaatctgacgaggcatgcgtgaag 174
|| |||||||||||||||||| |||||| |||||||| | || ||| ||| ||||||
Sbjct: 601 tctcatcttcaaagacggctagaaaagtttacaggagaaccggatgagatatgtgtgaag 660
Query: 175 gagattcaagagatggcagaagcgagtttgtccatcaaaactacttgcagcagcgtcaat 234
|| |||||||| ||||||||||| || ||||| ||| ||| ||| |||||| | ||||
Sbjct: 661 gaaattcaagaaatggcagaagcaagcttgtcaatccaaattac---cagcagggccaat 717
Query: 235 gaaacttctgtttcaagttttagcgctaatatggagattctaaggnnnnnnntggaagga 294
|||| || || ||| | | ||| |||||||||||||| || |||| ||
Sbjct: 718 gaaaattttgcttcgaactgcagcagcaatatggagattctgagaaggagaatggagaga 777
Query: 295 ttatcaaaggagcatctgttagagaggatggaagaggaatgcgggccaatgctctctaca 354
| ||||||| |||||||||| |||||||||| |||| ||| ||||| ||||||||
Sbjct: 778 ctgtcaaagggaaatctgttagaaaggatggaagttgaatatgggtcaatggtctctaca 837
Query: 355 gccaacacttctggttctagttctgttgctaattgcaagcgaattgaattacaggagatg 414
|||||| ||||| |||||||||| ||||| || ||||| || |||||| | || ||
Sbjct: 838 tccaacagttctgcatctagttctgctgctacttccaagcaaaatgaatttcctgaaata 897
Query: 415 tcttcgtcgtccatgagaccacagagcaaggagagaaagttgtacgaggagagggcatgc 474
||||| || || |||||| || ||||||| |||| |||||||| ||| ||||
Sbjct: 898 tcttcatcctcattgagacaaccatgcaaggaactaaagccctacgaggaaaggccatgt 957
Query: 475 tcaggatgctgcaaggctatagtgcaaagggttgtggagcaagttcgagctgaaacggag 534
|||||| |||||||||||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 958 tcaggaggctgcaaggctatagtgcgaagggttgtggagcaagttcgtgctgagacggag 1017
Query: 535 caatggtctcaaatgcaagagatgctgggacaagtaagggatgagatggaagaattgcag 594
|||||||| |||||||||||||||||||| || || ||| |||||||||||||| | ||
Sbjct: 1018 caatggtcccaaatgcaagagatgctggggcaggtcaggcatgagatggaagaactacaa 1077
Query: 595 gcttccagagatttttgggaagatcgagcacttgattctgattatcaaattcaatctcta 654
| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1078 gtttctagagatttttgggaagatagagcacttgattctgattatcaaattcaatctcta 1137
Query: 655 caatctgcagtgaaagagtggagaaggaaagctgtttcttctgaagccaaggcaaatgag 714
|| || ||||||||||| |||| ||||||| | ||||||||| | ||||||| ||||
Sbjct: 1138 cagtcagcagtgaaagaatggaagctgaaagctctctcttctgaatcaaaggcaagtgag 1197
Query: 715 ctacaagctcagg 727
|| ||||||||||
Sbjct: 1198 ctgcaagctcagg 1210
Score = 54.0 bits (27), Expect = 2e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1006 aggcaaaatagcagggcagtttttccattgc 1036
|||||||||||||||||||||||||| ||||
Sbjct: 1504 aggcaaaatagcagggcagtttttcctttgc 1534