Jatropha Genome Database

JcCA0312601.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0312601.20 + phase: 0 
         (615 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29827.m002565 NAD dependent epimerase/dehydratase, putative           198   3e-50

>29827.m002565 NAD dependent epimerase/dehydratase, putative
          Length = 939

 Score =  198 bits (100), Expect = 3e-50
 Identities = 417/525 (79%)
 Strand = Plus / Plus

                                                                       
Query: 75  gacatttgatcaaaaaatggaagtgagaagggcaatagaaaatgctaagatacccttcac 134
           |||||||||||| ||||||  |||||| |  ||||||||| | ||||| |||||||||||
Sbjct: 399 gacatttgatcagaaaatgatagtgaggaaagcaatagaagaagctaacatacccttcac 458

                                                                       
Query: 135 ttatgtctctgcaaattgttatgccggttactttgttggcaacctctcacaacttgggac 194
           ||| |||||||| || || |  ||||||||||| || ||||| || ||||| ||||  | 
Sbjct: 459 ttacgtctctgctaactgcttcgccggttacttcgtcggcaatctgtcacagcttgaaag 518

                                                                       
Query: 195 actctctcctccaagaaataaagtgttcctctatggggatggcaatgtcaaggctgttta 254
            ||  ||||||| | | | ||||| |   | |  ||||| || || |||||||  || | 
Sbjct: 519 gcttactcctccgacagacaaagtatgtattttcggggacggaaacgtcaaggtggtatt 578

                                                                       
Query: 255 catggaagaagatgacattgccacatacacaattaaaacaatagatgatcctcgaacttt 314
            ||||| ||||||||| |||| |||||||| || ||| |||||||||||||||||||| |
Sbjct: 579 tatggatgaagatgacgttgcaacatacaccatcaaagcaatagatgatcctcgaactct 638

                                                                       
Query: 315 gaacaaaacattgtacctccggccaccggaaaacattctctcgcaaaggcaactagttga 374
           |||||| || || || ||   ||||||||||||||| ||| ||||||| ||| |||||||
Sbjct: 639 gaacaagacgttatatctaaagccaccggaaaacatcctcacgcaaagacaaatagttga 698

                                                                       
Query: 375 gatgtgggaaaatctcagtggcaaaagcctagaaaagataagtatttctgcagaagaatt 434
           ||||||||| || ||   ||| || | ||| ||||| | |||  | |||||   ||||||
Sbjct: 699 gatgtgggagaagctgtctgggaagaccctggaaaaaacaagcgtctctgccccagaatt 758

                                                                       
Query: 435 cttagactccatgaaagatgcggattatgaagccaaagtaggaattgggcacttctatca 494
           | | | || |||||||||||||||| ||| ||||  || |||||| ||||| ||||||||
Sbjct: 759 cctggcctgcatgaaagatgcggatcatgcagcccgagcaggaatagggcatttctatca 818

                                                                       
Query: 495 cnnnnnnnacgagggttgtttggcaaactttgaaataggaaaagatggagaagaagcttc 554
                   | || ||||| ||| |||||||||| |||||||||||||||| |||||||||
Sbjct: 819 tatattctatgaaggttgcttgacaaactttgagataggaaaagatggagcagaagcttc 878

                                                        
Query: 555 aaatctttatccagaagtgaagtatactcgcatggatgagtattt 599
           ||||||||||||||||||  ||||||| |||||||||||||||||
Sbjct: 879 aaatctttatccagaagtcgagtatacacgcatggatgagtattt 923