Jatropha Genome Database
- JcCA0312361.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0312361.20 - phase: 1 /pseudo/partial
(1437 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30138.m004050 Galactoside 2-alpha-L-fucosyltransferase, putative 636 0.0
29813.m001528 Galactoside 2-alpha-L-fucosyltransferase, putative 165 9e-40
29686.m000874 Galactoside 2-alpha-L-fucosyltransferase, putative 66 6e-10
29686.m000876 Galactoside 2-alpha-L-fucosyltransferase, putative 62 1e-08
29686.m000877 Galactoside 2-alpha-L-fucosyltransferase, putative 56 6e-07
>30138.m004050 Galactoside 2-alpha-L-fucosyltransferase, putative
Length = 1656
Score = 636 bits (321), Expect = 0.0
Identities = 698/820 (85%), Gaps = 4/820 (0%)
Strand = Plus / Plus
Query: 621 tttcttcggaaaataccttggttgataatcaaaacagacaactactttgtcccatctcta 680
||||||| ||||||||| ||||||||||| |||||||| |||||||| ||||||| ||
Sbjct: 823 tttcttcagaaaataccctggttgataatgaaaacagataactacttcatcccatccctc 882
Query: 681 ttcttgattccatcttttgagcaagaattgaacaatctatttccaaacaaggaaa--gtt 738
|||||||| |||||||||||||||||| |||| | ||||| |||||||||||| |||
Sbjct: 883 ttcttgatcccatcttttgagcaagaactgaatagcctattcacaaacaaggaaacagtt 942
Query: 739 tttcactacttgggtcgatatctctttcaccccacaaattcagtgtggggacttattact 798
|| |||| ||||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 943 ttccacttcttgggtcgatatcttttccaccccacaaattcagtatggggacttattact 1002
Query: 799 agatactatcacacttatttagctaaagcagatgaaaaaataggcattcagattagaata 858
||||||||||| ||||||| |||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1003 agatactatcatgcttatttggctaaagcagatgaaaaaataggcatccagatcagaata 1062
Query: 859 ttcggttctgggaccagtccattcgaatatgtgttggatcagatactaaattgcacagtc 918
|| | ||||||||| |||| ||| ||||||||||||||||||||||| ||| ||
Sbjct: 1063 tttgattctgggactggtcctttccaatatgtgttggatcagatactatcttgtactaca 1122
Query: 919 agggagaatatactgcccgaattcaacaggcaggaacaggatcccagccaatatgga-ac 977
| |||||| |||||||| ||| | ||||||||||| | |||| |||| |||| ||
Sbjct: 1123 aaggagaaaatactgcctgaaattaacaggcaggatcccagcaccagtcaatctggagac 1182
Query: 978 tcagaagtctaaagctctgctggtgacatctttaagctcttggtactctcagaagatgag 1037
| |||||||||||| || ||||||||||||||||| | ||||||||| ||||||||||
Sbjct: 1183 t-gcaagtctaaagctgtggtggtgacatctttaagcccctggtactctgagaagatgag 1241
Query: 1038 aaacatgtattgggaacacccatccatgacaggggaattgataggtatttaccagccaag 1097
|||||||||||||||||| |||||||||||| |||| | |||||||||||||||||
Sbjct: 1242 aaacatgtattgggaacatccatccatgacatctgaatcagttggtatttaccagccaag 1301
Query: 1098 tcatgaagagtatcagcaaacagaaaagcagaatcataaccggaaggcttgggcagaaat 1157
| |||||||||||||||||||||||||||||| || ||| | ||||| |||||||||||
Sbjct: 1302 ttatgaagagtatcagcaaacagaaaagcagatacacaacagaaaggcatgggcagaaat 1361
Query: 1158 gtacttgctgagcttgactgatgtattagtcacgagttcatggtccacttttggttatgt 1217
||| || |||||||| |||||||| ||||||| || |||||||| || || || |||||
Sbjct: 1362 gtatttactgagcttaactgatgtgctagtcacaagctcatggtctacgttcgggtatgt 1421
Query: 1218 agctcaaggtctaggcggattgaagccatggatactgtacaaacctgagaatcaatcagc 1277
||||||||||| || || |||||| | |||||||| ||||||||||||||||| || ||
Sbjct: 1422 ggctcaaggtctcggagggttgaagtcttggatactctacaaacctgagaatcagtctgc 1481
Query: 1278 ccctgatccaccctgtcgtcgagccatgtctgcagaaccttgttttcatgcacctccatt 1337
||||||||||| ||| | |||||||||| || |||||||| ||||||||||| ||
Sbjct: 1482 tcctgatccaccgtgtgttggagccatgtcgatggagccttgtttccatgcacctccttt 1541
Query: 1338 ttacgactgcaaagctcggaaaggcattgacacgggagcacttgtgcctcatgtgaggca 1397
||| |||||||| ||| ||| ||| |||||||| || ||||| ||||||||||||| |||
Sbjct: 1542 ttatgactgcaaggcttggagagggattgacaccggtgcactagtgcctcatgtgacgca 1601
Query: 1398 ctgtgaggacatgagttggggtctcaagcttgttgatgtt 1437
||||||||||||||| |||||||||||||| || ||||||
Sbjct: 1602 ctgtgaggacatgagctggggtctcaagctcgtcgatgtt 1641
Score = 317 bits (160), Expect = 1e-85
Identities = 412/496 (83%)
Strand = Plus / Plus
Query: 35 caagctgctaggtggtcttcttgccaatggattcaatgaggaaacctgtattagtaggta 94
||||||||| |||||||||||||| |||||||| ||| ||||||| | || |||||
Sbjct: 303 caagctgctcggtggtcttcttgctgctggattcagtgaaagaacctgtctcagcaggta 362
Query: 95 tcaatcagtctcttatcgcaaagaactaccccataaaccttcttcttaccttatttctag 154
|||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 363 tcaatcagccttttatcgcaaagaactaccccataaaccttcttcttacctcatttctaa 422
Query: 155 tttacggaattatgaagctcttcataaaaaatgtggacctcacactgaatcctataaaat 214
||| | | ||||||| ||| || |||| ||||||||| || ||||||| ||||||||
Sbjct: 423 gttaagaagttatgaaattctccacaaaagatgtggaccacatactgaattctataaaaa 482
Query: 215 ggcagttgaacaacttaagtctgggaataatcctgaatcctctgattgtagttatctagt 274
|| |||||||||| |||| || ||| | | | ||||||||||||||||||| ||||
Sbjct: 483 agctcttgaacaactgaagttcggtaatcagcaggcatcctctgattgtagttatgtagt 542
Query: 275 gtggatctcctttagtggactaggaaataggatactgacattagcttcagcatttctcta 334
|||||||| | |||||| |||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 543 atggatctcttatagtgggttagggaataggatactaacattagcttctgcatttcttta 602
Query: 335 cgctcttgtcacaaaccgagttctacttatagaccctggagttgacatggcagatctttt 394
|||||| | ||||||||||| |||||| | ||||||||| ||||||| ||||| ||
Sbjct: 603 tgctcttctaacaaaccgagtcctacttgtggaccctggaattgacataattgatctctt 662
Query: 395 ttgtgaaccatttcctgatgtcttctggtttcttcccttagatttccctcttaaaggtca 454
|| |||||||||| || |||| |||||||||||| ||||||||| |||| || |||
Sbjct: 663 ctgcaaaccatttccagaggtctcctggtttcttccaacagatttcccccttagagatca 722
Query: 455 gttcaacagctttaatcagagatctcctgcttgttatggaagaatgctgaaggatagcaa 514
||||| |||| |||||| | |||||| ||||||||||||||||||||||||||||
Sbjct: 723 attcaatagctataatcaaatgtctcctagctgttatggaagaatgctgaaggatagcag 782
Query: 515 ttctacaaatttacat 530
||||||||||||||||
Sbjct: 783 ttctacaaatttacat 798
>29813.m001528 Galactoside 2-alpha-L-fucosyltransferase, putative
Length = 1737
Score = 165 bits (83), Expect = 9e-40
Identities = 305/379 (80%)
Strand = Plus / Plus
Query: 1040 acatgtattgggaacacccatccatgacaggggaattgataggtatttaccagccaagtc 1099
||||||| |||||||||||| | | ||| |||||| | || ||| |||||||||||||||
Sbjct: 1325 acatgtactgggaacacccaactaagacgggggaagtcattggtgtttaccagccaagtc 1384
Query: 1100 atgaagagtatcagcaaacagaaaagcagaatcataaccggaaggcttgggcagaaatgt 1159
|||| |||||||| ||||| || ||||| | || ||| ||||||||||||| |||||||
Sbjct: 1385 atgaggagtatcaacaaacggagaagcatatgcacaacaggaaggcttgggctgaaatgt 1444
Query: 1160 acttgctgagcttgactgatgtattagtcacgagttcatggtccacttttggttatgtag 1219
|| | || || ||||||||| || || || ||||| ||||| || ||||||||||| |
Sbjct: 1445 acctcctcagtttgactgataggttggttacaagttcttggtcaacctttggttatgttg 1504
Query: 1220 ctcaaggtctaggcggattgaagccatggatactgtacaaacctgagaatcaatcagccc 1279
| |||||||| || || |||||||| ||||| |||||||| ||||| ||| | ||||||
Sbjct: 1505 cacaaggtcttggaggcttgaagccgtggatcctgtacaagcctgaaaatgagacagccc 1564
Query: 1280 ctgatccaccctgtcgtcgagccatgtctgcagaaccttgttttcatgcacctccatttt 1339
|||||||||| ||||| | || ||||| || |||||||||||||| ||||| || |
Sbjct: 1565 ctgatccaccttgtcgcagggcaatgtcaatggacccttgttttcatgctcctcccttct 1624
Query: 1340 acgactgcaaagctcggaaaggcattgacacgggagcacttgtgcctcatgtgaggcact 1399
| || ||||| ||| || ||| | ||| || || ||||| || ||||||||||| || |
Sbjct: 1625 atgattgcaaggctaagagaggaactgatacaggtgcactcgttcctcatgtgagacatt 1684
Query: 1400 gtgaggacatgagttgggg 1418
||||||| ||||| |||||
Sbjct: 1685 gtgaggatatgagctgggg 1703
Score = 89.7 bits (45), Expect = 4e-17
Identities = 123/149 (82%)
Strand = Plus / Plus
Query: 558 ctccatctagtccatgattatgacgatcaagataagcttttcttctgtgatgaagatcaa 617
|||||||||| || |||||||| || || ||||||||||||||||| | |||||||||
Sbjct: 841 ctccatctagctcacgattatgatgaccatgataagcttttcttctgccaagaagatcaa 900
Query: 618 gcttttcttcggaaaataccttggttgataatcaaaacagacaactactttgtcccatct 677
|| | ||| ||| | || |||||||| | |||||||| ||||||||||||||||||
Sbjct: 901 tctctacttgctaaagtcccctggttgattgtgaaaacagataactactttgtcccatct 960
Query: 678 ctattcttgattccatcttttgagcaaga 706
|| |||||||| |||||| |||||||||
Sbjct: 961 cttttcttgatcacatcttatgagcaaga 989
>29686.m000874 Galactoside 2-alpha-L-fucosyltransferase, putative
Length = 1809
Score = 65.9 bits (33), Expect = 6e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 1198 tggtccacttttggttatgtagctcaaggtctaggcggattgaagccatggat 1250
||||| |||||||| |||||||||||||||||||| || || |||||||||||
Sbjct: 1555 tggtctacttttgggtatgtagctcaaggtctaggaggtttaaagccatggat 1607
>29686.m000876 Galactoside 2-alpha-L-fucosyltransferase, putative
Length = 1620
Score = 61.9 bits (31), Expect = 1e-08
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 1168 agcttgactgatgtattagtcacgagttcatggtccacttttggttatgtagctcaaggt 1227
||||||| |||||| || |||| ||||| ||||| |||||||| ||||| |||||||||
Sbjct: 1348 agcttgagtgatgtgttgatcactagttcttggtctacttttggctatgttgctcaaggt 1407
Query: 1228 ctaggcggattgaagccatggat 1250
|||| || |||||||||||||
Sbjct: 1408 ttaggaggtctgaagccatggat 1430
>29686.m000877 Galactoside 2-alpha-L-fucosyltransferase, putative
Length = 1056
Score = 56.0 bits (28), Expect = 6e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1213 tatgtagctcaaggtctaggcggattgaagccatggatactgtacaaacctgagaa 1268
|||||||||||||| || || || |||||||||||||| ||||||| ||||||||
Sbjct: 853 tatgtagctcaaggccttggtggcttgaagccatggatcctgtacaggcctgagaa 908