Jatropha Genome Database
- JcCA0312091.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0312091.10 - phase: 0 /partial
(435 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29939.m000547 nucleic acid binding protein, putative 347 3e-95
29729.m002351 nucleic acid binding protein, putative 329 8e-90
>29939.m000547 nucleic acid binding protein, putative
Length = 1935
Score = 347 bits (175), Expect = 3e-95
Identities = 349/407 (85%)
Strand = Plus / Plus
Query: 1 atgggagatcttcaagggagtttgcctccttgctccgcttccaccttttcctcctcttca 60
||||||||||||||| || ||||| || ||||||| |||| |||| ||||||| ||||
Sbjct: 1 atgggagatcttcaatggtgtttgtcttcttgctcttcttcaacctcttcctcccattca 60
Query: 61 cttaatctatgcccattatcaattgatccagaactgtggctaatggctgagcaaaggatc 120
||| |||||| |||||| ||||||||| | ||||| ||||||||||||||| | |||| |
Sbjct: 61 cttgatctatacccattgtcaattgattcggaactctggctaatggctgagaagaggacc 120
Query: 121 caagagatacttcggattattcaacctactttggcttctgagcagaagaggaaggaggtc 180
|| ||||||||| || || |||||||| ||| | |||||||||||||||| ||||||||
Sbjct: 121 caggagatactttgggttcttcaaccttcttcgtcttctgagcagaagagaaaggaggtt 180
Query: 181 attgattatatccggagattaattaagggttattatgcaactgaggtctttccatctggt 240
||||||||||| | || ||||| ||| | |||||||||||||||||||||||| ||||
Sbjct: 181 attgattatattcaaaggttaatcaagcatcattatgcaactgaggtctttccatttggt 240
Query: 241 tcagtgccactgaaaacttatcttcctgatggagatattgatctaactgtcctcagctat 300
|| || ||||||||||| ||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 241 tctgtaccactgaaaacatatcttcctgatggagatattgatctaactgctctcagccat 300
Query: 301 caaaacatggaagaagatttggctagagaagtctacaacatgctcaaatatgaagagcag 360
|||||||||||||| ||||||||||||||||||| | | || |||| ||||| |||||||
Sbjct: 301 caaaacatggaagaggatttggctagagaagtctgcgatatcctcacatatgcagagcag 360
Query: 361 caccctatgtctgaagtaaaagatgtccagtatattcaagcacaggt 407
| | | |||||||||||||||||| | |||||||||||||||||
Sbjct: 361 aatcttgagtctgaagtaaaagatgtacgatatattcaagcacaggt 407
>29729.m002351 nucleic acid binding protein, putative
Length = 1968
Score = 329 bits (166), Expect = 8e-90
Identities = 349/410 (85%)
Strand = Plus / Plus
Query: 1 atgggagatcttcaagggagtttgcctccttgctccgcttccaccttttcctcctcttca 60
|||||||||||||| || ||||| | |||||||| |||| |||| ||||||| ||||
Sbjct: 1 atgggagatcttcactggtgtttgtcaccttgctcttcttcaacctcttcctccaattca 60
Query: 61 cttaatctatgcccattatcaattgatccagaactgtggctaatggctgagcaaaggatc 120
||| |||||| |||||| ||||||||| ||||||| ||||||||||||||| | ||| |
Sbjct: 61 cttgatctattcccattgtcaattgattcagaactctggctaatggctgagaagagggcc 120
Query: 121 caagagatacttcggattattcaacctactttggcttctgagcagaagaggaaggaggtc 180
|| ||||||||| ||||| |||||||| |||||||||||||||||||||| |||| |||
Sbjct: 121 caggagatactttggattcttcaaccttctttggcttctgagcagaagagaaaggtggtt 180
Query: 181 attgattatatccggagattaattaagggttattatgcaactgaggtctttccatctggt 240
||||||||||| | || ||||||||| | ||| ||||||||||||||| |||| ||||
Sbjct: 181 attgattatattcaaaggttaattaagcatcattttgcaactgaggtcttgccatttggt 240
Query: 241 tcagtgccactgaaaacttatcttcctgatggagatattgatctaactgtcctcagctat 300
|| || ||||||||||| ||||||||||||||||||||||||||||||| || ||| ||
Sbjct: 241 tctgtaccactgaaaacgtatcttcctgatggagatattgatctaactgcactgagccat 300
Query: 301 caaaacatggaagaagatttggctagagaagtctacaacatgctcaaatatgaagagcag 360
|||||||||||||| ||||||| ||||||| | | ||| || |||| |||||||||||||
Sbjct: 301 caaaacatggaagaggatttggttagagaaatatgcaatatcctcacatatgaagagcag 360
Query: 361 caccctatgtctgaagtaaaagatgtccagtatattcaagcacaggttaa 410
| || ||||||||| |||||||| | ||||||||||||||||||||
Sbjct: 361 aattctgagtctgaagttaaagatgtacgatatattcaagcacaggttaa 410