Jatropha Genome Database
- JcCA0311501.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0311501.20 + phase: 0
(1026 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29883.m001968 chloroplast inner envelope protein, putative 1090 0.0
29844.m003204 chloroplast inner envelope protein, putative 480 e-135
>29883.m001968 chloroplast inner envelope protein, putative
Length = 1029
Score = 1090 bits (550), Expect = 0.0
Identities = 852/952 (89%), Gaps = 3/952 (0%)
Strand = Plus / Plus
Query: 73 ttttcgggatcagattttcatgggaagtactttccgagagtcaatttagtgtctagcgct 132
|||||||| || |||||| | |||||| | ||||| ||||| |||||| ||||| ||
Sbjct: 79 ttttcgggttctgattttaacgggaagcattttcctagagtgaatttaacatctagttct 138
Query: 133 agaatttttaaggcaacaagaatagtgacacccaaatgcagtttgtcagcctccaggcca 192
||||| || || |||||| ||||| |||| || |||||||| ||||| || ||||||
Sbjct: 139 agaatcttgaaaacaacaacaatag---cacctaagtgcagtttatcagcttctaggcca 195
Query: 193 gcctctcaacccaggtttatccaacacaagaaagaagctttttggttctacagattcctt 252
|| ||||| || || |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 196 gcttctcagcctagatttatccagcacaagaaagaggctttttggttctatagattccta 255
Query: 253 tcaattgtctatgaccatgtgataaaccctgggcactggactgaagacatgagggatgat 312
|| ||||| ||||| |||||||||||||| || |||||||||||||||||||| || |||
Sbjct: 256 tccattgtatatgatcatgtgataaacccgggccactggactgaagacatgagagacgat 315
Query: 313 gcgttagagcctgctgatcttaataacaggaatatgttagttgtagatgtcggtggtggc 372
|| ||||| ||||||||||||| | |||||||||||||||| ||||||||||||||||||
Sbjct: 316 gcattagaacctgctgatcttagtgacaggaatatgttagtggtagatgtcggtggtggc 375
Query: 373 actggttttactactctgggtattgttaagcatgtagatgctaaaaatgttactattctt 432
|||||||| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 376 actggtttcactactctgggcattgttaagcatgtggatgctaaaaatgttacaattctt 435
Query: 433 gatcagtccccgcatcagcttgcaaaggctaagcaaaaggagcccttgaaagattgtaag 492
||||| || || ||||||||||||||||| |||||||||||||| || || || ||||||
Sbjct: 436 gatcaatctcctcatcagcttgcaaaggccaagcaaaaggagcctttaaaggagtgtaag 495
Query: 493 attattgagggtgatgcagaggatctgccatttcctactgattatgctgacagatatgtg 552
|| ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 496 atcattgagggtgatgcagaagatctgccatttcctactgactatgcagacagatatgtg 555
Query: 553 tctgctgggagtattgagtactggcctgacccacaacgtggcatcaaggaagcatatagg 612
|||||||||||||||||||||||||| || || ||||| ||||||| |||||||||||||
Sbjct: 556 tctgctgggagtattgagtactggccagatccgcaacggggcatcagggaagcatatagg 615
Query: 613 gtcttgaaactaggaggaaaagcctgcttaattggcccggtgtacccaacattttggttg 672
|||||||||||||||||||| |||||||||||||| || |||||||||||||||||| ||
Sbjct: 616 gtcttgaaactaggaggaaaggcctgcttaattggtccagtgtacccaacattttggctg 675
Query: 673 tctcgcttctttgctgatgtttggatgctcttcccaaaggaggaggagtacattgaatgg 732
|| ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 676 tcccgcttctttgcagatgtttggatgctgttcccaaaggaggaagaatacattgaatgg 735
Query: 733 tttcaaaaggccgggtttaaggatgttcagctgaagaggattggcccaaaatggtatcgt 792
|| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 736 ttccaaaaggccgggtttaaggatgttcagttgaagaggattggcccaaaatggtatcgc 795
Query: 793 ggtgttcgccgacatggactgatcatgggatgttcagtaacaggagttaaacctgcatct 852
|||||||| | || ||||| |||||||||||||| |||||||| ||||||||||| |||
Sbjct: 796 ggtgttcgaaggcacggactaatcatgggatgttctgtaacaggtgttaaacctgcttct 855
Query: 853 ggagattctcctttacagcttggtccaaaagaagaggatgtatcaaagccggtgcaccca 912
||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 856 ggagattctcctttacagcttggtccaaaggaagaggatgtatcaaagcctgtgaaccca 915
Query: 913 tttgtgttccttctgcgatttgttttgggtgccttggctgcaacgtactatgtgttggtc 972
||||||||| ||||||| ||| ||||||||||| |||| ||||||||||||||| |||||
Sbjct: 916 tttgtgttctttctgcggtttattttgggtgccatggcagcaacgtactatgtgctggtc 975
Query: 973 ccaatttacatgtggctcaaagatcaaatcgtacctaaaggtagaccaatct 1024
|| || ||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 976 cctatctacatgtggctcaaagatcaaattgtacccaaaggtagaccaatct 1027
>29844.m003204 chloroplast inner envelope protein, putative
Length = 1026
Score = 480 bits (242), Expect = e-135
Identities = 593/710 (83%)
Strand = Plus / Plus
Query: 184 tccaggccagcctctcaacccaggtttatccaacacaagaaagaagctttttggttctac 243
|||||||| || || ||||| || || || || ||||||| ||| || ||||||||||||
Sbjct: 184 tccaggcctgcttcgcaacctagattcatacagcacaagacagaggcattttggttctac 243
Query: 244 agattcctttcaattgtctatgaccatgtgataaaccctgggcactggactgaagacatg 303
|| ||| | || || || ||||| ||| | ||||||||||| |||||||| || ||||||
Sbjct: 244 aggttcttgtctatagtttatgatcatatcataaaccctggtcactggacggaggacatg 303
Query: 304 agggatgatgcgttagagcctgctgatcttaataacaggaatatgttagttgtagatgtc 363
|| ||||| || | || || ||||||||| || | ||||||||| |||||| |||||
Sbjct: 304 agagatgaggcacttgaaccagctgatctttatgataggaatatgacagttgtcgatgtt 363
Query: 364 ggtggtggcactggttttactactctgggtattgttaagcatgtagatgctaaaaatgtt 423
|||||||| ||||||||||||||| | ||||||||||||||||| ||||| || ||||||
Sbjct: 364 ggtggtggtactggttttactactttaggtattgttaagcatgttgatgccaagaatgtt 423
Query: 424 actattcttgatcagtccccgcatcagcttgcaaaggctaagcaaaaggagcccttgaaa 483
|| |||||||| |||||||| || |||||||| |||||||||||||||| || |||||
Sbjct: 424 acaattcttgaccagtcccctcaccagcttgccaaggctaagcaaaaggcaccattgaag 483
Query: 484 gattgtaagattattgagggtgatgcagaggatctgccatttcctactgattatgctgac 543
|| || ||||| ||||| || ||||||||||| || || || |||||||||||||| ||
Sbjct: 484 gaatgcaagataattgaaggagatgcagaggaccttcctttccctactgattatgcagat 543
Query: 544 agatatgtgtctgctgggagtattgagtactggcctgacccacaacgtggcatcaaggaa 603
|||||||||||||||||||| |||||||||||||| || ||||| || ||||| ||||||
Sbjct: 544 agatatgtgtctgctgggagcattgagtactggccggatccacagcgaggcattaaggaa 603
Query: 604 gcatatagggtcttgaaactaggaggaaaagcctgcttaattggcccggtgtacccaaca 663
||||| || || ||||| |||||||||| ||||| | || || || |||||||||||
Sbjct: 604 gcatacagagtactgaaaataggaggaaaggcctgtcttataggtcctgtgtacccaacc 663
Query: 664 ttttggttgtctcgcttctttgctgatgtttggatgctcttcccaaaggaggaggagtac 723
||||||||||||||||||||||| ||||| ||||||||||| || |||||||| ||||||
Sbjct: 664 ttttggttgtctcgcttctttgcggatgtgtggatgctctttcctaaggaggaagagtac 723
Query: 724 attgaatggtttcaaaaggccgggtttaaggatgttcagctgaagaggattggcccaaaa 783
|||||||||||| ||| || ||||||||||||||| | || || || ||||| ||||||
Sbjct: 724 attgaatggtttaaaagagctgggtttaaggatgttaaactcaaaagaattggtccaaaa 783
Query: 784 tggtatcgtggtgttcgccgacatggactgatcatgggatgttcagtaacaggagttaaa 843
||||| ||||||||||| || ||||| |||| ||||| || || || || |||||||||
Sbjct: 784 tggtaccgtggtgttcgtcggcatggcttgattatgggttgctctgtgactggagttaaa 843
Query: 844 cctgcatctggagattctcctttacagcttggtccaaaagaagaggatgt 893
|| ||| |||||||||||| | |||||||| ||||| | |||||||||
Sbjct: 844 ccattatccggagattctcctctgcagcttggcccaaaggcagaggatgt 893