Jatropha Genome Database

JcCA0311301.10
Show Alignment: 
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0311301.10 + phase: 0 /pseudo/partial
         (359 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011207 Kiwellin, putative                                      133   8e-31
27394.m000355 Kiwellin, putative                                       74   6e-13
30169.m006561 Kiwellin, putative                                       74   6e-13
29678.m000503 Kiwellin, putative                                       58   4e-08
30174.m009009 Kiwellin, putative                                       54   6e-07
30174.m009011 Kiwellin, putative                                       54   6e-07

>30190.m011207 Kiwellin, putative
          Length = 567

 Score =  133 bits (67), Expect = 8e-31
 Identities = 205/251 (81%)
 Strand = Plus / Plus

                                                                       
Query: 99  gtggtggcattatcaactggatggtttagtaataagaagagatgacataactatatcacc 158
           ||||||||||| || ||||||||||| | | | |||||||| || ||||| || || |||
Sbjct: 307 gtggtggcattgtcgactggatggttcaatcacaagaagaggtgccataattacataacc 366

                                                                       
Query: 159 attaaaggaaatggaaggagtgtaaaggctatggtggttgatgagtgtgattctacattg 218
           ||| | || ||||||| ||||   |||||||||||||| ||||| || || |||||  ||
Sbjct: 367 attcatgggaatggaaagagtactaaggctatggtggtggatgaatgcgactctaccatg 426

                                                                       
Query: 219 gggtgtgatagtgatcatggttatcaacctccatgcaagaaaaatatagttgatgcctca 278
           ||||| |||| ||| ||||||||||| || |||||    || || || || ||||| |||
Sbjct: 427 gggtgcgataatgagcatggttatcagccaccatgtgcaaataacattgtcgatgcatca 486

                                                                       
Query: 279 aaagctgtttggaaagctttaggtgttaaggaaagtgatgatagatgggggtttatggat 338
           ||||| ||||||||||||||||||||||||||||||||||  |||||||| |  ||||||
Sbjct: 487 aaagcagtttggaaagctttaggtgttaaggaaagtgatggcagatggggttggatggat 546

                      
Query: 339 attacttggac 349
           || || |||||
Sbjct: 547 atcacctggac 557


>27394.m000355 Kiwellin, putative
          Length = 564

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 112/137 (81%)
 Strand = Plus / Plus

                                                                       
Query: 165 ggaaatggaaggagtgtaaaggctatggtggttgatgagtgtgattctacattggggtgt 224
           |||||||||| |||||| | |||||  || |||||||| |||||||||||  |||| |||
Sbjct: 373 ggaaatggaaagagtgtcagggctaaagtagttgatgaatgtgattctaccatgggatgt 432

                                                                       
Query: 225 gatagtgatcatggttatcaacctccatgcaagaaaaatatagttgatgcctcaaaagct 284
           |||  ||| |||| |||||| ||||| |||   || ||||| || |||||||||||||| 
Sbjct: 433 gattctgaacatgattatcagcctccttgccctaacaatattgtggatgcctcaaaagca 492

                            
Query: 285 gtttggaaagctttagg 301
           |||||||| || |||||
Sbjct: 493 gtttggaatgccttagg 509


>30169.m006561 Kiwellin, putative
          Length = 564

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 112/137 (81%)
 Strand = Plus / Plus

                                                                       
Query: 168 aatggaaggagtgtaaaggctatggtggttgatgagtgtgattctacattggggtgtgat 227
           ||||||| |||||| ||||| | ||| |||||||| |||||||||||  |||| ||||||
Sbjct: 376 aatggaaagagtgtcaaggccaaggtagttgatgaatgtgattctaccatgggatgtgat 435

                                                                       
Query: 228 agtgatcatggttatcaacctccatgcaagaaaaatatagttgatgcctcaaaagctgtt 287
             |||||||| |||||| ||||| ||    || ||||| || |||||||| ||||| |||
Sbjct: 436 tctgatcatgattatcagcctccttgtcctaacaatattgtggatgcctctaaagcagtt 495

                            
Query: 288 tggaaagctttaggtgt 304
           ||||| || ||||||||
Sbjct: 496 tggaaggcattaggtgt 512


>29678.m000503 Kiwellin, putative
          Length = 564

 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 261 aatatagttgatgcctcaaaagctgtttggaaagctttaggtgtt 305
           ||||| || |||||||||||||| |||||||| ||||||||||||
Sbjct: 469 aatattgtagatgcctcaaaagcggtttggaaggctttaggtgtt 513


>30174.m009009 Kiwellin, putative
          Length = 567

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                       
Query: 191 ggtggttgatgagtgtgattctacattggggtgtgatagtgatcatggttatcaacctcc 250
           |||||| || |||||||| |||||  | |||||||||   |||||||  || || |||||
Sbjct: 405 ggtggtggacgagtgtgactctactgttgggtgtgatgcagatcatgactaccagcctcc 464

                                                              
Query: 251 atgcaagaaaaatatagttgatgcctcaaaagctgtttggaaagctttagg 301
            ||| | || |||||||||| |||||||||||  ||||||||||| |||||
Sbjct: 465 ttgccataacaatatagttgctgcctcaaaagtagtttggaaagccttagg 515


>30174.m009011 Kiwellin, putative
          Length = 567

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 234 catggttatcaacctccatgcaagaaaaatatagttgatgcctcaaaagctgtttggaaa 293
           |||| |||||||||||||||  | || || || |||||||||||||| ||||| ||||||
Sbjct: 448 catgattatcaacctccatgtgataataacattgttgatgcctcaaaggctgtctggaaa 507

                      
Query: 294 gctttaggtgt 304
           || || |||||
Sbjct: 508 gcgttgggtgt 518