Jatropha Genome Database
- JcCA0311291.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0311291.20 - phase: 0
(1035 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29631.m001020 conserved hypothetical protein 720 0.0
>29631.m001020 conserved hypothetical protein
Length = 990
Score = 720 bits (363), Expect = 0.0
Identities = 555/619 (89%)
Strand = Plus / Plus
Query: 271 tggagagaaaatccttcctgggttgatcagagtccagaaataaaggtcagtgtaccaaaa 330
||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 235 tggagagaaaatccttcctggattgatcagcctccagaaataaaggtcagtgtaccaaaa 294
Query: 331 ggttctctctgcaaccttaatgtgaaatgcaatgttgggttgccaccagatgcagtgtac 390
||||||||||||||||| |||||||||| ||||||||||||||| ||||| |||||||||
Sbjct: 295 ggttctctctgcaacctaaatgtgaaattcaatgttgggttgcctccagacgcagtgtac 354
Query: 391 aatattgtgattgaccctgataataggagggttttcaaaaacatcaaggaagtgatatcc 450
|||||||| | ||||||||||||| | || ||||||||||||||||| |||||||||||
Sbjct: 355 aatattgttactgaccctgataatcgcagagttttcaaaaacatcaaagaagtgatatct 414
Query: 451 aggaaagttctgcttgatgaaggccatagacaggtggttgaagtagaacaagcagctata 510
||| ||||||||||||||||||| ||||| |||||||||||| | ||||||||||||||
Sbjct: 415 agggaagttctgcttgatgaaggtcataggcaggtggttgaattggaacaagcagctatt 474
Query: 511 tggaaattcctttggtggtcagggaccatttcagttcatgttttagttgatcagaacaga 570
||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||
Sbjct: 475 tggaaattcctgtggtggtcagggaccatttcagtgcatgtcttagttgatcaaaacaga 534
Query: 571 aaagatctcacaatgaagttcaagcaagtgaaaaccggattcatggaaaaatttgaagga 630
|||||| | |||||||| |||||||||||||||||||| |||||| || |||||||||||
Sbjct: 535 aaagatttgacaatgaaattcaagcaagtgaaaaccgggttcatgaaacaatttgaagga 594
Query: 631 tgctggagagtggaacctgtgttcgtcgatgaagatatatgctatccattcaaacctaaa 690
||||||||||| || |||||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 595 tgctggagagtagagcctgtgtttattgatcaagatatatgctatccattcaaacctaaa 654
Query: 691 acatgggcagaatatcattcatgtacaagaggcaaaggaaggataggatcaaaggtgagc 750
||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||||
Sbjct: 655 acatgggcagactattgctggtgtactggaggcaaaggaaggataggatcaaaggtgagc 714
Query: 751 ttggagcagttaatccagccgactatagttccacccccgccgatttcctggtatctaaga 810
|||||||||||||||||||| | |||||||||| || || |||||||||||| | ||
Sbjct: 715 ttggagcagttaatccagccagcattagttccaccaccacccatttcctggtatttgcga 774
Query: 811 ggaatcacctctagaaccactgaaatgattgtatatgatctgcttgctgaagctgccaga 870
|||||||| |||| |||||||||||||||| | ||||| |||||||||| |||||||||
Sbjct: 775 ggaatcactactaggaccactgaaatgattgcaaatgatttgcttgctgaggctgccaga 834
Query: 871 atccggggggatcttaata 889
||| |||| ||| ||||||
Sbjct: 835 atcaggggagattttaata 853
Score = 61.9 bits (31), Expect = 7e-09
Identities = 94/115 (81%)
Strand = Plus / Plus
Query: 12 agatgtgaaaataaaaggcatggaaacttcccatagtgtgaggaacagaagccacaaggc 71
||||||||||| || || ||||| |||| || |||| |||| || |||| | ||||||
Sbjct: 12 agatgtgaaaagaacagccatgggaactcccaatagcatgagaaatggaaggcgcaaggc 71
Query: 72 atttgatccatcatttcttgtgcaactacaaaacaagcttcagaattgcttaaag 126
||||||||| || ||||||||| |||| |||||||||||| ||||| ||||||
Sbjct: 72 atttgatccctctgatcttgtgcagctaccaaacaagcttcaaaattgtttaaag 126
Score = 52.0 bits (26), Expect = 7e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 955 tcatctgacattaaagagagatgggc 980
||||||||||||||||||||||||||
Sbjct: 901 tcatctgacattaaagagagatgggc 926