Jatropha Genome Database

JcCA0311161.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0311161.20 + phase: 1 /pseudo/partial
         (344 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008869 phospholipase d zeta, putative                           90   1e-17

>30128.m008869 phospholipase d zeta, putative
          Length = 3234

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                       
Query: 39  caatcttattccttgaggcagtttcctcaattgtgttggatttttgatgaattgcccaaa 98
           |||||||||||||| |||||||||||| || |  ||||||||||| ||||| |||| || 
Sbjct: 64  caatcttattcctttaggcagtttcctgaactaggttggattttttatgaactgccaaag 123

                                        
Query: 99  gcaacaattgtttcggtttcgaaacctga 127
           ||||| ||| |||||||||||||||||||
Sbjct: 124 gcaactattctttcggtttcgaaacctga 152



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 245 aaaacgtgcaatgattgaggaatttcacgagaaacaagaacaggtt 290
           |||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 216 aaaacgtgcaattattgaggaatttcatgagaaacaagagcaggtt 261