Jatropha Genome Database
- JcCA0311161.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0311161.10 + phase: 0
(819 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008868 conserved hypothetical protein 299 1e-80
>30128.m008868 conserved hypothetical protein
Length = 666
Score = 299 bits (151), Expect = 1e-80
Identities = 265/303 (87%)
Strand = Plus / Plus
Query: 517 gcaaggaaacgattccttgaggttggcagagatccacgacccgtcatgcgagaggcttat 576
|||||||| | |||||||||||||||||||||||||||||| ||||||||||| || |||
Sbjct: 364 gcaaggaagcaattccttgaggttggcagagatccacgacctgtcatgcgagaagcctat 423
Query: 577 aacatgtttaaagatggtggtgatccagaaaagcttgttactgcattttcaaatggctcg 636
| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |
Sbjct: 424 agcatgtttaaagatggcggtgatccagaaaagcttgtcactgcattttcaaatggccgg 483
Query: 637 gagaatgagtatttctatgcttctttgtatgcgggactatatcatgaatctcagaaaaaa 696
||||||||||| || ||||||||||| ||||| || |||||||||||||| ||||| ||
Sbjct: 484 gagaatgagtacttttatgcttctttatatgctgggctatatcatgaatcccagaatgaa 543
Query: 697 ttggatgcagccaaatttcatatagttgctgcatgcaagtctctttatggacagaggtct 756
||||||||||||||||||||||||||||| | ||||||| ||| ||||| |||||
Sbjct: 544 ccagatgcagccaaatttcatatagttgctgcgtctaagtctccttacggacaagggtct 603
Query: 757 gatgattatatggcagcgctttccaaggttcactgtctatgtcgaaactggagcatcgac 816
||||| |||||||| || ||| |||| || || |||||||| ||||||||||||| |||
Sbjct: 604 gatgactatatggctgctcttgccaatgtccattgtctatgcagaaactggagcattgac 663
Query: 817 tga 819
|||
Sbjct: 664 tga 666
Score = 182 bits (92), Expect = 2e-45
Identities = 261/318 (82%), Gaps = 12/318 (3%)
Strand = Plus / Plus
Query: 167 tatctagaagagtctttctcccttcagtatctggtatctgggatgccttaactggaggtg 226
|||| |||||| | ||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 56 tatcaagaagattatttctccctgcagtatctggtatctgggatgccttaac---aggtg 112
Query: 227 gcggcaacaacccccgtcaagctgttttgaagattagacgtggaatgtcactcttcaggg 286
| |||||| ||||| |||| || || ||||||||||||||| |||||| ||
Sbjct: 113 ccaacaacaatgcccgtgaagccgtgctggcaattagacgtggaatgctactctttagac 172
Query: 287 agggggatgttttggggtccttggcagagtttgataaggcaatagaattggattctcgtc 346
|||||||||||||||| || || | || |||||||||||||| || |||||| ||||||
Sbjct: 173 agggggatgttttgggttctttagtggaatttgataaggcaatggagttggatcctcgtc 232
Query: 347 aaaaggcgtgtaggtttgatctgtggcaaagggggctatcactttactatcttgacaggt 406
||||||| | |||| |||||||| || |||| |||||||||||||| ||||
Sbjct: 233 aaaaggctt---------atctttggcaaagaggcttatcgctttactatcttgataggt 283
Query: 407 ttgaagaaggggcaaagcagtttcgattagatgttgcacaaaatccaaatgacacagaag 466
|||| ||||||||| ||||||| || ||||||||||| |||||||||||||| ||||| |
Sbjct: 284 ttgaggaaggggcagagcagttccggttagatgttgcgcaaaatccaaatgatacagagg 343
Query: 467 agtcaatttggtgctttc 484
||||||| ||||||||||
Sbjct: 344 agtcaatatggtgctttc 361