Jatropha Genome Database
- JcCA0311061.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0311061.10 + phase: 0
(1581 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30073.m002313 origin recognition complex subunit, putative 783 0.0
>30073.m002313 origin recognition complex subunit, putative
Length = 2148
Score = 783 bits (395), Expect = 0.0
Identities = 745/861 (86%), Gaps = 3/861 (0%)
Strand = Plus / Plus
Query: 463 gttcttaccaagaatatggagtttgttgacgatctactaacatttgaagagcttggcttg 522
|||||||| |||||| ||||||||| || || ||||| ||||| |||||||||||||
Sbjct: 457 gttcttactaagaatttggagtttgccgatgacctactgacattcaaagagcttggctta 516
Query: 523 catttaaaatccaaaggatgccatgtggctaatctctcctcattggacttctcggtgaaa 582
||||||||||| |||||||| | ||||||||||| || ||| |||| ||||| ||||||
Sbjct: 517 catttaaaatctcaaggatgctacgtggctaatctttcttcactggatttctcagtgaaa 576
Query: 583 aatggcattggcggctgtctaagaagtttattgaggcagcttgtaatggttactttggat 642
||||| ||||| || |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 577 aatggaattggtggttgtctaagaagtttattgagacagcttgtaatggttactttggat 636
Query: 643 gcacctgatatttccatcttagcaacatggtatagagaacaaggaaactgtaacaatccc 702
||||||||||| |||||||| ||||| ||||| |||||||||||| |||||| |||||
Sbjct: 637 gcacctgatatatccatcttggcaacgtggtacagagaacaaggagactgtactaatccg 696
Query: 703 attgttgtaatcatagatgatttggagcgatgttgtgggtctgttttgtctgatttcatc 762
||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 697 gttgttataatcatagatgatttggagcgatgttgtgggtctgtcttgtctgatttcatc 756
Query: 763 cttatgttgagtgaatggatattaaaaatcccagtgattttaataatgggagttgcaaca 822
|||||||| |||||||| ||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 757 attatgttgtgtgaatgggtattaaaaatcccagtgattttaattatgggagtggcaaca 816
Query: 823 acccttgatgccctgaggaatatacttccttcaaatatgattcatcatttgtgtccttgt 882
|| |||||||| |||| || || |||||| |||||||| | ||||||||||| ||||||
Sbjct: 817 acacttgatgctgtgagaaacattcttcctgcaaatatgctacatcatttgtgcccttgt 876
Query: 883 aatttcattttgagaaccccttcagagaggatggatgcaattgtcgaggctgttcttgtg 942
|| |||||||| | |||| || |||||||||||||||||||| |||||||| ||||||
Sbjct: 877 aagttcatttttggcaccctgtctgagaggatggatgcaattgttgaggctgtccttgtg 936
Query: 943 aagcagtgttctgggttctgtataagccacaaggtggctgtttttctgagaagttatttt 1002
||||| |||||||| ||| ||||| | |||||||||||||||||| |||||| ||| |||
Sbjct: 937 aagcaatgttctggtttcagtataggtcacaaggtggctgtttttttgagaaattacttt 996
Query: 1003 gtgtgccaggatgggaccataacatctttcataaaagctttaaagattgcatgtgctcag 1062
|| |||| ||||| ||| | ||||||||||||| |||||||||||| |||||||||||
Sbjct: 997 gtaagccatgatggaaccttgacatctttcataagagctttaaagatagcatgtgctcaa 1056
Query: 1063 cacttctccatggaatctctaagcttcatcctcccatggtttcttcttgaagaggaaagt 1122
|| || || |||||| ||||||||||||| |||| ||||| ||||||||||||| | |
Sbjct: 1057 catttttctatggaacctctaagcttcatgctcctatggt---ttcttgaagaggataat 1113
Query: 1123 gaggtgctagaaggtgaaaattatggattatcaccagaaattgtgctcaagcgtgctttt 1182
||||| || | |||||||||||||||||||||||||||| | || ||||| |||||||
Sbjct: 1114 aaggtgttacatggtgaaaattatggattatcaccagaaaatatgtgcaagcatgctttt 1173
Query: 1183 gatcttccatcttgtaggagaaataagatggctgaacaaaatggtgatattttggtccat 1242
|| |||||||||||| |||||| || |||| |||||| |||||||||| ||||||||||
Sbjct: 1174 gagcttccatcttgtttgagaaagaaaatggttgaacagaatggtgatactttggtccat 1233
Query: 1243 gggttgtcagaattgaagaaattgcaaaaacagtggagcactatagttatgtgcctatat 1302
||| |||| ||||||||||||||| | |||||||| | |||||||||||||||||||
Sbjct: 1234 gggctgtcggaattgaagaaattgtgcagtcagtggagtaatatagttatgtgcctatat 1293
Query: 1303 gaagttgtaaagtgtgataaa 1323
|||| || || |||||||||
Sbjct: 1294 gaagctgggaaatgtgataaa 1314
Score = 56.0 bits (28), Expect = 7e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 135 aacagcaaaaaccaggaggcgaattgatttatctcc 170
|||| ||||||| |||||||||||||||||||||||
Sbjct: 141 aacaccaaaaacaaggaggcgaattgatttatctcc 176