Jatropha Genome Database

JcCA0310961.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0310961.20 + phase: 0 /partial
         (210 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29727.m000487 (S)-2-hydroxy-acid oxidase, putative                    178   8e-45
29727.m000482 (S)-2-hydroxy-acid oxidase, putative                     78   2e-14
29727.m000486 (S)-2-hydroxy-acid oxidase, putative                     62   1e-09

>29727.m000487 (S)-2-hydroxy-acid oxidase, putative
          Length = 1095

 Score =  178 bits (90), Expect = 8e-45
 Identities = 183/210 (87%), Gaps = 3/210 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagagtgaaccagtgaatgtgaatgagtttcaagagttggccaagcaagcccttcca 60
           |||| ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 1   atggggagtgaaccagtgaatgtgaatgagtttcaagaattggctaagcaagcacttcca 60

                                                                       
Query: 61  aaaatgtactatgattactatgctggaggagctgaggaccagcatacgttgaaggagaat 120
           |||||||| ||||| ||||||||||||||||| |||||||| || ||| | |||||||||
Sbjct: 61  aaaatgtattatgactactatgctggaggagccgaggaccaacacacgctcaaggagaat 120

                                                                       
Query: 121 gtggaagcattttgtaggaatcacgttttcgaccttagaatccttgtcgatgtgagtcaa 180
           ||||||||||||   ||| ||||||  | || || |||||| || || |||||||| |||
Sbjct: 121 gtggaagcatttcacagg-atcacg-atccggcc-tagaattctggtagatgtgagccaa 177

                                         
Query: 181 attgacatgtcaactactgtattgggttac 210
           || || |||||||||||| |||||||||||
Sbjct: 178 atagatatgtcaactactatattgggttac 207


>29727.m000482 (S)-2-hydroxy-acid oxidase, putative
          Length = 903

 Score = 77.8 bits (39), Expect = 2e-14
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 10  gaaccagtgaatgtgaatgagtttcaagagttggccaagcaagcccttccaaaaatgtac 69
           ||||| || |||||||||||||||||||   |||| ||||||||||| ||||||||||||
Sbjct: 52  gaacctgttaatgtgaatgagtttcaagttctggctaagcaagccctcccaaaaatgtac 111

                  
Query: 70  tatgatt 76
           |||||||
Sbjct: 112 tatgatt 118


>29727.m000486 (S)-2-hydroxy-acid oxidase, putative
          Length = 1095

 Score = 61.9 bits (31), Expect = 1e-09
 Identities = 100/123 (81%)
 Strand = Plus / Plus

                                                                       
Query: 10  gaaccagtgaatgtgaatgagtttcaagagttggccaagcaagcccttccaaaaatgtac 69
           |||||||| |||||||||||||| |||    |||| ||||||| ||||||||| ||||| 
Sbjct: 10  gaaccagttaatgtgaatgagttacaaattctggctaagcaagtccttccaaagatgtat 69

                                                                       
Query: 70  tatgattactatgctggaggagctgaggaccagcatacgttgaaggagaatgtggaagca 129
           ||||| |||||  | || || || ||||| ||||||||  | || ||||||| |||||||
Sbjct: 70  tatgactactacaccgggggggcagaggatcagcatacactaaaagagaatgaggaagca 129

              
Query: 130 ttt 132
           |||
Sbjct: 130 ttt 132