Jatropha Genome Database
- JcCA0310961.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0310961.10 + phase: 0 /pseudo
(1023 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29727.m000481 (S)-2-hydroxy-acid oxidase, putative 821 0.0
29727.m000486 (S)-2-hydroxy-acid oxidase, putative 545 e-154
29727.m000482 (S)-2-hydroxy-acid oxidase, putative 291 4e-78
29727.m000487 (S)-2-hydroxy-acid oxidase, putative 260 1e-68
29727.m000485 (S)-2-hydroxy-acid oxidase, putative 170 1e-41
29693.m001985 (S)-2-hydroxy-acid oxidase, putative 80 3e-14
>29727.m000481 (S)-2-hydroxy-acid oxidase, putative
Length = 1095
Score = 821 bits (414), Expect = 0.0
Identities = 747/858 (87%)
Strand = Plus / Plus
Query: 143 cacctattatggtcgctccaactgcaatgcataagctagcacaccctgaaggagaaattg 202
||||||||||| | || || ||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 218 cacctattatgatagcaccgactgctatgcataagctagcacatcctgaaggagagattg 277
Query: 203 ctactgccagagcagcagctgcctgcaataccataatggttttatccttctctgctacct 262
||||||| |||||||| ||||| | ||| ||| |||||||||||||||||||||||||||
Sbjct: 278 ctactgctagagcagctgctgcgtccaacaccgtaatggttttatccttctctgctacct 337
Query: 263 gcagtctggaggaggttgctgcctgctgcaacgctgttcggttcttccaattatatgtgt 322
||||| |||||||||||||||| | ||||| |||||||| ||||| ||||||||||| |
Sbjct: 338 gcagtttggaggaggttgctgctagttgcaatgctgttcgtttctttcaattatatgtat 397
Query: 323 ataaaagacgcgatatagctgctaacttagtgcagagagctgaaaggaaaggatataagg 382
|||||||||||||||| |||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 398 ataaaagacgcgatatcgctgctaaattagtgcagagagctgaaaggaatggttataagg 457
Query: 383 ctattgtcctaacagtagacactccaagactaggtcgaagggaagctgatataaagaata 442
||||||| ||||||| || ||||||||| ||||| || ||||| ||||||||||| |
Sbjct: 458 ctattgtactaacagctgattgtccaagactcggtcgcagagaagcagatataaagaaca 517
Query: 443 aaatgatttcacctcagttgaagaatctggagggtctaatatcaactcaagttgtatctg 502
||||| || ||| ||| ||||||| ||||||| || |||||||| ||||||||||||
Sbjct: 518 aaatgtttgtaccacagctgaagaacttggagggcctcttatcaactgaagttgtatctg 577
Query: 503 acaaaggttcgagcttggaagcttatgccaatcaaatccttgatgcttcattgagttgga 562
| |||||||| |||| ||||||||||||||| ||| |||||||||| ||| ||||||
Sbjct: 578 aaaaaggttcaggcttagaagcttatgccaatgaaacatttgatgcttctttgtgttgga 637
Query: 563 aggatgtaagatggttaaagtctattacaaacttgccaattctgatcaaaggggtactca 622
|||||||| |||||||||| ||||||||||||||||||||||||||||| || |||||||
Sbjct: 638 aggatgtaggatggttaaaatctattacaaacttgccaattctgatcaagggtgtactca 697
Query: 623 ctcgtgaagatgccacgaaagccatggaagttggtgttgatggaattattgtctccaatc 682
||| |||||||||| ||| ||||||||||| ||||||| || ||||||||||| ||||
Sbjct: 698 ctcctgaagatgccgtgaaggccatggaagtaggtgttgcagggattattgtctctaatc 757
Query: 683 atggagcacgacagctagattatactcctgcaactatttctgctttagaagaggttgttg 742
||||||| ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||
Sbjct: 758 atggagctcgacagctagactattctcctgccactatttctgctttggaagaggttgttc 817
Query: 743 atgctgttagaggaaaatttccggttcttcttgatgggggagtgcgacggggaactgatg 802
|||||||| |||| ||| |||| ||||| |||||||| |||||||| || ||||||||||
Sbjct: 818 atgctgttggagggaaaattccagttctccttgatggaggagtgcggcgaggaactgatg 877
Query: 803 ttttcaaggcattggcacttggtgcacaagcagtccttgttggaaggcctgttatttatg 862
| ||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 878 tattcaaggcattggcacttggtgcacaagcagtccttgttggcaggcctgtaatctatg 937
Query: 863 gactggcagtgaagggagaacatggagcaagacgggtgattgaaatgttgaaggatgagc 922
| ||||||||||| |||||| |||||| ||||| || || ||||| | |||||||| |
Sbjct: 938 ggctggcagtgaaaggagaagatggagtaagacaagtcatgaaaatgctcaaggatgaac 997
Query: 923 tcgagctgactatggccctttctggctgtcctagtttgacagatattactaggactcatg 982
| ||||| | |||||||||||||||||||||||||||| | |||||||||||| ||||
Sbjct: 998 ttgagctcgccatggccctttctggctgtcctagtttgaaacatattactaggagccatg 1057
Query: 983 taaggactaagcatgaca 1000
|||| ||| ||| |||||
Sbjct: 1058 taagaactgagcgtgaca 1075
Score = 105 bits (53), Expect = 5e-22
Identities = 120/141 (85%), Gaps = 1/141 (0%)
Strand = Plus / Plus
Query: 1 atggcagctgaaccagttaatgtgaatgagttccaaattttggctaagcaagtactccca 60
||||| || |||||||||||||| ||||||||||||||| ||||||||||||| || |||
Sbjct: 1 atggccgcagaaccagttaatgttaatgagttccaaattctggctaagcaagtccttcca 60
Query: 61 aaaatgtacta-gacttctacactgggggagcagaggaccagtatactctacaagataat 119
|||||| | || |||||||||| ||||||||||| || ||| |||| || |||| |||
Sbjct: 61 aaaatgcattatgacttctacagcgggggagcagaagatcagcatacattaaaagagaat 120
Query: 120 gtggaagcatttcaaaaaatc 140
|| |||||||| ||||||||
Sbjct: 121 gtccaagcatttaaaaaaatc 141
>29727.m000486 (S)-2-hydroxy-acid oxidase, putative
Length = 1095
Score = 545 bits (275), Expect = e-154
Identities = 704/847 (83%)
Strand = Plus / Plus
Query: 143 cacctattatggtcgctccaactgcaatgcataagctagcacaccctgaaggagaaattg 202
||||||||||| | || ||||| || ||||||||||||||||| ||||||||||| |||
Sbjct: 218 cacctattatgatagcaccaacagctatgcataagctagcacatcctgaaggagaggttg 277
Query: 203 ctactgccagagcagcagctgcctgcaataccataatggttttatccttctctgctacct 262
|||| || |||||||||||||| | | |||||||||||| |||||| |||||||| ||
Sbjct: 278 ctaccgctagagcagcagctgcatcagacaccataatggttgtatcctcctctgctagct 337
Query: 263 gcagtctggaggaggttgctgcctgctgcaacgctgttcggttcttccaattatatgtgt 322
|||||||| ||||||||||||| ||||||| ||||| |||||||| |||||||||||||
Sbjct: 338 gcagtctgaaggaggttgctgctagctgcaatgctgtccggttctttcaattatatgtgt 397
Query: 323 ataaaagacgcgatatagctgctaacttagtgcagagagctgaaaggaaaggatataagg 382
|||||||||| ||||| ||| ||| |||||||||||||||||| | || |||||||| |
Sbjct: 398 ataaaagacgtgatatggctactatattagtgcagagagctgaatgcaatggatataaag 457
Query: 383 ctattgtcctaacagtagacactccaagactaggtcgaagggaagctgatataaagaata 442
| ||| || |||||| |||| |||||| | |||||||||||||| || ||||||||||
Sbjct: 458 caattatcttaacagctgacagtccaaggttcggtcgaagggaagcagacataaagaata 517
Query: 443 aaatgatttcacctcagttgaagaatctggagggtctaatatcaactcaagttgtatctg 502
| |||||| ||| ||| ||||||| |||||| | | || || | ||||||| |||
Sbjct: 518 agatgattgtaccacagcggaagaatgtggaggttttcttaccacccaaagttgtgcctg 577
Query: 503 acaaaggttcgagcttggaagcttatgccaatcaaatccttgatgcttcattgagttgga 562
| || ||||| ||| |||||||||||||||||| | ||||| |||| ||| ||||||
Sbjct: 578 aaaacggttcaggctatgaagcttatgccaatcaacacattgattcttccttgtgttgga 637
Query: 563 aggatgtaagatggttaaagtctattacaaacttgccaattctgatcaaaggggtactca 622
||||| || |||||||| ||||||||||| ||||||||| ||||||| || || ||||
Sbjct: 638 aggatatagagtggttaaaatctattacaaatttgccaattttgatcaagggtgtgctca 697
Query: 623 ctcgtgaagatgccacgaaagccatggaagttggtgttgatggaattattgtctccaatc 682
| |||||||||||| ||| ||||||||| | ||||||| ||||||||||||||||| |
Sbjct: 698 cacgtgaagatgccgtgaaggccatggaaataggtgttgcaggaattattgtctccaacc 757
Query: 683 atggagcacgacagctagattatactcctgcaactatttctgctttagaagaggttgttg 742
| ||||| || |||||||||||||| ||||| |||||||||| || || |||||||||
Sbjct: 758 acggagctcgccagctagattatacacctgccactatttctgtcttggaggaggttgttc 817
Query: 743 atgctgttagaggaaaatttccggttcttcttgatgggggagtgcgacggggaactgatg 802
| |||||| ||| ||| |||| ||||| |||||||| ||| | || |||||||||||||
Sbjct: 818 aagctgttggagagaaagttccagttctccttgatggaggaattcggcggggaactgatg 877
Query: 803 ttttcaaggcattggcacttggtgcacaagcagtccttgttggaaggcctgttatttatg 862
| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| || |
Sbjct: 878 tgttcaaggcattagcacttggtgcacaagcagtcctagttgggaggcctgttatatacg 937
Query: 863 gactggcagtgaagggagaacatggagcaagacgggtgattgaaatgttgaaggatgagc 922
| |||| |||||||||||| | |||| |||| ||||| ||||| ||||||||||||
Sbjct: 938 ggttggccgtgaagggagaagacggagtgagacaagtgatgaaaatgctgaaggatgagc 997
Query: 923 tcgagctgactatggccctttctggctgtcctagtttgacagatattactaggactcatg 982
| ||| | || |||||||||||||||||| ||| | ||| ||||||||| || | ||||
Sbjct: 998 ttgagatcaccatggccctttctggctgtgctactctgaaagatattaccagaagccatg 1057
Query: 983 taaggac 989
|||||||
Sbjct: 1058 taaggac 1064
Score = 121 bits (61), Expect = 9e-27
Identities = 122/141 (86%), Gaps = 1/141 (0%)
Strand = Plus / Plus
Query: 1 atggcagctgaaccagttaatgtgaatgagttccaaattttggctaagcaagtactccca 60
|||||||| ||||||||||||||||||||||| |||||| ||||||||||||| || |||
Sbjct: 1 atggcagcagaaccagttaatgtgaatgagttacaaattctggctaagcaagtccttcca 60
Query: 61 aaaatgtacta-gacttctacactgggggagcagaggaccagtatactctacaagataat 119
|| ||||| || |||| |||||| ||||| |||||||| ||| |||| ||| |||| |||
Sbjct: 61 aagatgtattatgactactacaccgggggggcagaggatcagcatacactaaaagagaat 120
Query: 120 gtggaagcatttcaaaaaatc 140
| |||||||||| ||| ||||
Sbjct: 121 gaggaagcatttaaaagaatc 141
>29727.m000482 (S)-2-hydroxy-acid oxidase, putative
Length = 903
Score = 291 bits (147), Expect = 4e-78
Identities = 383/461 (83%), Gaps = 3/461 (0%)
Strand = Plus / Plus
Query: 319 gtgtataaaagacgcgatatagctgctaacttagtgcagagagctgaaaggaaaggatat 378
|||||||||||||||||||| ||||||| |||||||||||||||||||| ||| || ||
Sbjct: 265 gtgtataaaagacgcgatattgctgctaccttagtgcagagagctgaaaagaatggttac 324
Query: 379 aaggctattgtcctaacagtagacactccaagactaggtcgaagggaagctgatataaag 438
||||||||||| |||||||| || ||||||||| |||||| | ||||| || ||||||
Sbjct: 325 aaggctattgtactaacagttgatactccaagatacggtcgaggagaagcagacataaag 384
Query: 439 aataaaatgatttcacctcagttgaagaatctggagggtctaatatcaactcaagttgta 498
|||||| |||| ||||||| |||| ||| |||||||||| || ||||| ||||| |
Sbjct: 385 aataaactgatagtacctcagctgaaaaatttggagggtctcttaacaactgcagttgca 444
Query: 499 tctgacaaaggttcgagcttggaagcttatgccaatcaaatccttgatgcttcattgagt 558
||||| || ||||| |||| ||||||| |||| ||| || |||||||| || ||
Sbjct: 445 tctgaaaacggttcaggcttagaagctt---tcaataaaacactcgatgcttctttctgt 501
Query: 559 tggaaggatgtaagatggttaaagtctattacaaacttgccaattctgatcaaaggggta 618
|||||||||||| ||||||||| ||||||||| ||||||||||||||||||| || |||
Sbjct: 502 tggaaggatgtagaatggttaaaatctattacagacttgccaattctgatcaagggagta 561
Query: 619 ctcactcgtgaagatgccacgaaagccatggaagttggtgttgatggaattattgtctcc 678
|| ||| |||||||||| ||| || ||||| | || ||| |||||||||||||||
Sbjct: 562 cttactggtgaagatgctgtgaaggctgtggaaataggcgtttcaggaattattgtctcc 621
Query: 679 aatcatggagcacgacagctagattatactcctgcaactatttctgctttagaagaggtt 738
||||||||||| || ||||||||||| |||||||| |||||||||||| | |||||||||
Sbjct: 622 aatcatggagctcgccagctagattacactcctgccactatttctgctctggaagaggtt 681
Query: 739 gttgatgctgttagaggaaaatttccggttcttcttgatgg 779
||| ||||| || |||||| | |||| ||||| ||||||||
Sbjct: 682 gttcatgctattggaggaagagttccagttctccttgatgg 722
Score = 85.7 bits (43), Expect = 5e-16
Identities = 83/95 (87%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 1 atggcagctgaaccagttaatgtgaatgagttccaaattttggctaagcaagtactccca 60
||||| || ||||| ||||||||||||||||| ||| || |||||||||||| ||||||
Sbjct: 43 atggctgcagaacctgttaatgtgaatgagtttcaagttctggctaagcaagccctccca 102
Query: 61 aaaatgtacta-gacttctacactgggggagcaga 94
||||||||||| || ||||||| ||| ||||||||
Sbjct: 103 aaaatgtactatgatttctacagtggaggagcaga 137
>29727.m000487 (S)-2-hydroxy-acid oxidase, putative
Length = 1095
Score = 260 bits (131), Expect = 1e-68
Identities = 655/827 (79%), Gaps = 2/827 (0%)
Strand = Plus / Plus
Query: 132 caaaaaatcttcacctattatggtcgctccaactgcaatgcataagctagcacaccctga 191
||||| |||| ||||||||||| | ||||| || || ||||||||||| ||| | |||||
Sbjct: 207 caaaatatctgcacctattatgattgctcctacagctatgcataagcttgcaaatcctga 266
Query: 192 aggagaaattgctactgccagagcagcagctgcctgcaataccataatggttttatcctt 251
||| || ||| || |||||||| ||||||| ||||| || || |||||||||||||
Sbjct: 267 aggtgaggctgccacagccagagctgcagctgtatgcaacacaattatggttttatccta 326
Query: 252 ctctg-ctacctgcagtctggaggaggttgctgcctgctgcaacgctgttcggttcttcc 310
| || || |||||| |||||||||||||| || | ||||| ||| |||| |||| |
Sbjct: 327 -tatgtcttcctgcacagtggaggaggttgcttccagttgcaatgctattcgattctatc 385
Query: 311 aattatatgtgtataaaagacgcgatatagctgctaacttagtgcagagagctgaaagga 370
|||||||||| || ||||| || |||||| | || | ||||||||||||||||||| |
Sbjct: 386 aattatatgtctacaaaaggcgagatatatcagcccagctagtgcagagagctgaaagaa 445
Query: 371 aaggatataaggctattgtcctaacagtagacactccaagactaggtcgaagggaagctg 430
| || || ||||||||||||||||| || || |||| ||||| ||| |||| || || |
Sbjct: 446 atggttacaaggctattgtcctaactgtggatgctcccagacttggtagaagagaggcag 505
Query: 431 atataaagaataaaatgatttcacctcagttgaagaatctggagggtctaatatcaactc 490
| || | || || ||| || |||| |||||||||||| | || |||||||||||||||
Sbjct: 506 acattagaaacaagatggttgcaccacagttgaagaattttgaaggtctaatatcaactg 565
Query: 491 aagttgtatctgacaaaggttcgagcttggaagcttatgccaatcaaatccttgatgctt 550
|||||| ||| | ||||||| | | | |||| || |||||| | | | |||||||
Sbjct: 566 aagttgcctctaatgaaggttcaaacctagaagtttttgccaaagagactttcgatgctt 625
Query: 551 cattgagttggaaggatgtaagatggttaaagtctattacaaacttgccaattctgatca 610
| || |||||||||| |||| ||||||| || ||||||| |||||||||||| || |
Sbjct: 626 ccatgtcttggaaggatataagctggttaagatccattacaagcttgccaattcttatta 685
Query: 611 aaggggtactcactcgtgaagatgccacgaaagccatggaagttggtgttgatggaatta 670
| |||||||| |||| ||||||||| | || || ||||||| ||||||| || |||
Sbjct: 686 agggggtacttactcatgaagatgctataaaggcagtggaagtaggtgttgccgggattg 745
Query: 671 ttgtctccaatcatggagcacgacagctagattatactcctgcaactatttctgctttag 730
| ||||| ||||||||||| || ||||||||||||| ||| |||||||| ||| | | |
Sbjct: 746 tggtctctaatcatggagctcgccagctagattatagtccagcaactatcactgttctgg 805
Query: 731 aagaggttgttgatgctgttagaggaaaatttccggttcttcttgatgggggagtgcgac 790
| ||||||||| |||| ||| |||| ||| |||| ||||| |||| |||||||| |
Sbjct: 806 aggaggttgttcatgccgttggagggaaaattcctgttctgtttgacgggggagtacaga 865
Query: 791 ggggaactgatgttttcaaggcattggcacttggtgcacaagcagtccttgttggaaggc 850
| ||||| |||||||| ||||| ||||| ||||| |||||||| || |||||||| ||||
Sbjct: 866 gaggaacagatgtttttaaggccttggctcttggcgcacaagctgttcttgttggcaggc 925
Query: 851 ctgttatttatggactggcagtgaagggagaacatggagcaagacgggtgattgaaatgt 910
| ||| | | ||| ||||| | |||||||| |||||| ||||| || |||||||||
Sbjct: 926 cagttgtctttgggctggcggcaaagggagattatggagtgagacgtgtaattgaaatgc 985
Query: 911 tgaaggatgagctcgagctgactatggccctttctggctgtcctagt 957
||||| ||||||| |||||||||||||| || |||||||||||||||
Sbjct: 986 tgaagaatgagcttgagctgactatggctctctctggctgtcctagt 1032
Score = 67.9 bits (34), Expect = 1e-10
Identities = 104/126 (82%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 9 tgaaccagttaatgtgaatgagttccaaattttggctaagcaagtactcccaaaaatgta 68
||||||||| |||||||||||||| ||| ||||||||||||| ||| |||||||||||
Sbjct: 9 tgaaccagtgaatgtgaatgagtttcaagaattggctaagcaagcacttccaaaaatgta 68
Query: 69 cta-gacttctacactgggggagcagaggaccagtatactctacaagataatgtggaagc 127
|| |||| ||| |||| ||||| |||||||| | || || | || |||||||||||
Sbjct: 69 ttatgactactatgctggaggagccgaggaccaacacacgctcaaggagaatgtggaagc 128
Query: 128 atttca 133
||||||
Sbjct: 129 atttca 134
>29727.m000485 (S)-2-hydroxy-acid oxidase, putative
Length = 441
Score = 170 bits (86), Expect = 1e-41
Identities = 216/258 (83%), Gaps = 1/258 (0%)
Strand = Plus / Plus
Query: 564 ggatgtaagatggttaaagtctattacaaacttgccaattctgatcaaaggggtactcac 623
||||||| ||||||||| |||||||||| |||| ||||||||||||| || ||||| ||
Sbjct: 3 ggatgtagaatggttaaaatctattacaaccttgtcaattctgatcaagggagtacttac 62
Query: 624 tcgtgaagatgccacgaaagccatggaagttggtgttgatggaattattgtctccaatca 683
| |||||||||| ||| || | ||| | ||| ||| ||||||||||||||||||||
Sbjct: 63 tggtgaagatgctgtgaaggctgtagaaataggtattgcaggaattattgtctccaatca 122
Query: 684 tggagcacgacagctagattatactcctgcaactatttctgctttagaagaggttgttga 743
|||||| || |||||||||||||||||||| |||||||| ||| | |||||||||||| |
Sbjct: 123 tggagctcgccagctagattatactcctgccactatttcagctctggaagaggttgttca 182
Query: 744 tgctgttagaggaaaatttccggttcttcttgatgggggagtgcgacggggaactgatgt 803
||| ||| |||| ||| | | ||||| |||||||| ||| | || | ||||||||||||
Sbjct: 183 tgccgttggagggaaaatactagttctccttgatggaggaatccggc-gggaactgatgt 241
Query: 804 tttcaaggcattggcact 821
|||||||||||||||||
Sbjct: 242 attcaaggcattggcact 259
>29693.m001985 (S)-2-hydroxy-acid oxidase, putative
Length = 1110
Score = 79.8 bits (40), Expect = 3e-14
Identities = 127/156 (81%)
Strand = Plus / Plus
Query: 663 tggaattattgtctccaatcatggagcacgacagctagattatactcctgcaactatttc 722
|||||| || ||||||||||||||||| || ||||| |||||| |||||||||||||
Sbjct: 741 tggaatcatcgtctccaatcatggagctcgccagcttgattatgttcctgcaactattat 800
Query: 723 tgctttagaagaggttgttgatgctgttagaggaaaatttccggttcttcttgatggggg 782
|| || ||||||||||| | |||| | ||| | |||| ||| |||||||||| ||
Sbjct: 801 ggccttggaagaggttgtcaaagctgctcaaggccgagttccagtttttcttgatggtgg 860
Query: 783 agtgcgacggggaactgatgttttcaaggcattggc 818
||| || || ||||| ||||||||||||||||||||
Sbjct: 861 agttcgtcgtggaacagatgttttcaaggcattggc 896