Jatropha Genome Database
- JcCA0310901.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0310901.20 + phase: 2 /pseudo/partial
(578 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28049.m000299 ubiquitin-conjugating enzyme E2, putative 672 0.0
30190.m010790 ubiquitin-conjugating enzyme E2, putative 394 e-109
30169.m006544 ubiquitin-conjugating enzyme E2, putative 218 3e-56
28128.m000154 ubiquitin-conjugating enzyme E2, putative 172 1e-42
29915.m000490 ubiquitin-conjugating enzyme E2, putative 151 5e-36
29728.m000818 ubiquitin-conjugating enzyme E2, putative 64 1e-09
>28049.m000299 ubiquitin-conjugating enzyme E2, putative
Length = 447
Score = 672 bits (339), Expect = 0.0
Identities = 417/443 (94%)
Strand = Plus / Plus
Query: 23 atggcttccaagcggatcttgaaggagctcaaggatctccagaaggatcctcctacctct 82
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggcttccaaacggatcttgaaggagctcaaggatctccagaaggatcctcctacctct 60
Query: 83 tgcagcgctggtccggtagctgaggacatgtttcactggcaagcaacaataatgggtcct 142
||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 tgcagtgctggacctgtagctgaggacatgtttcactggcaagccacaataatgggtccc 120
Query: 143 cctgacagtccttacactggaggcgtgtttctagttactattcattttcctcctgattat 202
|||||||||||||| |||| || ||||| || |||||||||||||||||||| ||||||
Sbjct: 121 cctgacagtccttatgctgggggtgtgttccttgttactattcattttcctccagattat 180
Query: 203 ccatttaagccacctaaggttgcattcaggacaaaggtttttcacccaaatattaacagt 262
|||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 181 ccatttaagccaccaaaggttgcattcaggacaaaggtttttcaccctaatatcaacagt 240
Query: 263 aatggcagcatttgccttgacattctaaaggagcagtggagcccagccctgacaatatct 322
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 241 aatggcagcatttgccttgacattctaaaggagcagtggagccctgccctgacaatatct 300
Query: 323 aaggtgttgctctccatatgttccctcttgacggacccaaacccagatgatcccttggtg 382
|||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| | |||
Sbjct: 301 aaggtgttactctccatatgttccctcttgacggacccgaacccagatgaccccctcgtg 360
Query: 383 ccagaaattgctcacatgtacaagacagacagggccaagtacgaggcaactgctaggagc 442
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 361 ccagaaattgctcatatgtacaagacagacagggccaagtacgaggcaacagctcggagc 420
Query: 443 tggacacagaagtatgccatggg 465
||||| |||||||||||||||||
Sbjct: 421 tggacccagaagtatgccatggg 443
>30190.m010790 ubiquitin-conjugating enzyme E2, putative
Length = 447
Score = 394 bits (199), Expect = e-109
Identities = 373/431 (86%)
Strand = Plus / Plus
Query: 35 cggatcttgaaggagctcaaggatctccagaaggatcctcctacctcttgcagcgctggt 94
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 13 cggatcttgaaggagctcaaggatctccagaaggatcctcctacctcttgcagcgcaggc 72
Query: 95 ccggtagctgaggacatgtttcactggcaagcaacaataatgggtcctcctgacagtcct 154
|| || ||||| |||||||| || |||||||||||||| ||||| ||||| || |||||
Sbjct: 73 ccagttgctgaagacatgttccattggcaagcaacaattatggggcctccggatagtcca 132
Query: 155 tacactggaggcgtgtttctagttactattcattttcctcctgattatccatttaagcca 214
|| | || || ||||||||||| || |||||||||||||| || ||||||||||| |||
Sbjct: 133 tatgccggtggagtgtttctagtcaccattcattttcctccagactatccatttaaacca 192
Query: 215 cctaaggttgcattcaggacaaaggtttttcacccaaatattaacagtaatggcagcatt 274
|||||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||||||
Sbjct: 193 cctaaggttgcattcaggacaaaggtctttcaccccaatatcaacagtaatggtagcatt 252
Query: 275 tgccttgacattctaaaggagcagtggagcccagccctgacaatatctaaggtgttgctc 334
|||||||| ||| | |||||||| |||||||| ||||| || ||||| |||||| ||||
Sbjct: 253 tgccttgatattttgaaggagcaatggagccctgccctcaccatatccaaggtgctgctt 312
Query: 335 tccatatgttccctcttgacggacccaaacccagatgatcccttggtgccagaaattgct 394
|| || ||||| || ||||||||||| || || ||||| || ||||| ||||| || ||
Sbjct: 313 tcaatttgttctctgttgacggacccgaatcccgatgacccattggtaccagagatcgcc 372
Query: 395 cacatgtacaagacagacagggccaagtacgaggcaactgctaggagctggacacagaag 454
|||||||||||||| || ||| ||| ||||||||||| || ||||||||||| ||||||
Sbjct: 373 cacatgtacaagacggataggagcaaatacgaggcaacagcaaggagctggactcagaag 432
Query: 455 tatgccatggg 465
||||| |||||
Sbjct: 433 tatgctatggg 443
>30169.m006544 ubiquitin-conjugating enzyme E2, putative
Length = 360
Score = 218 bits (110), Expect = 3e-56
Identities = 191/218 (87%)
Strand = Plus / Plus
Query: 23 atggcttccaagcggatcttgaaggagctcaaggatctccagaaggatcctcctacctct 82
||||| ||||| |||||||||||||||||||||||| | |||||||||||||| || ||
Sbjct: 1 atggcatccaaacggatcttgaaggagctcaaggatttacagaaggatcctcccacatcg 60
Query: 83 tgcagcgctggtccggtagctgaggacatgtttcactggcaagcaacaataatgggtcct 142
|||||||||||||| || ||||| ||||||||||| |||||||||||||| ||||| |||
Sbjct: 61 tgcagcgctggtcccgttgctgaagacatgtttcattggcaagcaacaatcatgggacct 120
Query: 143 cctgacagtccttacactggaggcgtgtttctagttactattcattttcctcctgattat 202
|| |||||||| || | ||||| || |||||||||||||||||||||||||| ||||||
Sbjct: 121 cccgacagtccgtatgcaggaggtgtttttctagttactattcattttcctccagattat 180
Query: 203 ccatttaagccacctaaggttgcattcaggacaaaggt 240
||||||||||| || ||||| || || || ||||||||
Sbjct: 181 ccatttaagcctccgaaggtggcttttagaacaaaggt 218
Score = 127 bits (64), Expect = 8e-29
Identities = 103/116 (88%)
Strand = Plus / Plus
Query: 350 ttgacggacccaaacccagatgatcccttggtgccagaaattgctcacatgtacaagaca 409
|||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 241 ttgacggatccaaaccctgatgatccattggtgccagagattgctcacatgtacaagaca 300
Query: 410 gacagggccaagtacgaggcaactgctaggagctggacacagaagtatgccatggg 465
|||||| ||||| || ||||||| || |||||||| |||||||||||||||||
Sbjct: 301 gacaggaataagtatgaaacaactgcaagaagctggacccagaagtatgccatggg 356
>28128.m000154 ubiquitin-conjugating enzyme E2, putative
Length = 447
Score = 172 bits (87), Expect = 1e-42
Identities = 309/383 (80%)
Strand = Plus / Plus
Query: 83 tgcagcgctggtccggtagctgaggacatgtttcactggcaagcaacaataatgggtcct 142
||||| |||||||| || ||||| |||||||| || |||||||||||||| ||||| ||
Sbjct: 61 tgcagtgctggtccagttgctgatgacatgttccattggcaagcaacaatcatgggcccg 120
Query: 143 cctgacagtccttacactggaggcgtgtttctagttactattcattttcctcctgattat 202
|||| || || | ||||| || |||||||| || | ||||| ||||| || || |||
Sbjct: 121 gctgatagcccatttactggtggtgtgtttcttgtatcaattcactttccaccagactat 180
Query: 203 ccatttaagccacctaaggttgcattcaggacaaaggtttttcacccaaatattaacagt 262
||||| |||||||| |||||| | ||| | ||||||||||| || || || || |||||
Sbjct: 181 ccattcaagccacccaaggtttccttccgtacaaaggttttccatcccaacatcaacagc 240
Query: 263 aatggcagcatttgccttgacattctaaaggagcagtggagcccagccctgacaatatct 322
|| || |||||||||||||||||||| || ||||||||||| || ||||| || ||||||
Sbjct: 241 aacggaagcatttgccttgacattctcaaagagcagtggagtcctgcccttaccatatct 300
Query: 323 aaggtgttgctctccatatgttccctcttgacggacccaaacccagatgatcccttggtg 382
||||| | || || || || || ||| |||| || ||||||||||||||||| |||||
Sbjct: 301 aaggttcttctgtcaatctgctcactcctgactgatccaaacccagatgatccgctggtg 360
Query: 383 ccagaaattgctcacatgtacaagacagacagggccaagtacgaggcaactgctaggagc 442
|| || ||||||||||||||||||| || || || || || ||| | |||||| | |
Sbjct: 361 cctgagattgctcacatgtacaagatggatagagcaaaatatgagactactgctcgatcc 420
Query: 443 tggacacagaagtatgccatggg 465
||||||||||| |||||||||||
Sbjct: 421 tggacacagaaatatgccatggg 443
>29915.m000490 ubiquitin-conjugating enzyme E2, putative
Length = 393
Score = 151 bits (76), Expect = 5e-36
Identities = 214/260 (82%)
Strand = Plus / Plus
Query: 23 atggcttccaagcggatcttgaaggagctcaaggatctccagaaggatcctcctacctct 82
|||||||| ||||| ||||||||||| || |||||| | ||||| ||||| ||||| |||
Sbjct: 1 atggcttctaagcgtatcttgaaggaactgaaggatttgcagaaagatccgcctacttct 60
Query: 83 tgcagcgctggtccggtagctgaggacatgtttcactggcaagcaacaataatgggtcct 142
||||| || ||||| ||||| || |||||||| |||||||||||||| || ||||| ||
Sbjct: 61 tgcagtgcaggtcctgtagcggaagacatgttccactggcaagcaacgatcatgggaccg 120
Query: 143 cctgacagtccttacactggaggcgtgtttctagttactattcattttcctcctgattat 202
| || || || || | ||||| || |||||||| ||||| ||||| || |||||||||
Sbjct: 121 tccgatagcccatatgcaggaggtgtttttctagtgactatccatttcccacctgattat 180
Query: 203 ccatttaagccacctaaggttgcattcaggacaaaggtttttcacccaaatattaacagt 262
|| || ||||| || ||||||||||| ||||| ||||| |||||||| || || |||||
Sbjct: 181 cctttcaagcctccaaaggttgcatttaggactaaggtctttcacccgaacataaacagc 240
Query: 263 aatggcagcatttgccttga 282
||||| |||||||| |||||
Sbjct: 241 aatggaagcatttgtcttga 260
>29728.m000818 ubiquitin-conjugating enzyme E2, putative
Length = 447
Score = 63.9 bits (32), Expect = 1e-09
Identities = 167/212 (78%)
Strand = Plus / Plus
Query: 185 cattttcctcctgattatccatttaagccacctaaggttgcattcaggacaaaggttttt 244
||||| ||||||||||| || || |||||||| |||| | | |||| |||||| ||||
Sbjct: 163 catttccctcctgattaccccttcaagccacccaaggcttccttcaagacaaaagtttac 222
Query: 245 cacccaaatattaacagtaatggcagcatttgccttgacattctaaaggagcagtggagc 304
|||||||| || || || | || || || |||||||||||||| ||||| || ||||||
Sbjct: 223 cacccaaacatcaatagcagcggtagtatctgccttgacattctcaaggaacaatggagc 282
Query: 305 ccagccctgacaatatctaaggtgttgctctccatatgttccctcttgacggacccaaac 364
|| || || ||| | || |||||||| | || ||||| || || |||| || ||||||
Sbjct: 283 cctgcacttacagtttcaaaggtgttattatcaatatgctctctgctgacagatccaaac 342
Query: 365 ccagatgatcccttggtgccagaaattgctca 396
|| |||||||| ||||||| || ||||||||
Sbjct: 343 cctgatgatcctctggtgcctgagattgctca 374