Jatropha Genome Database
- JcCA0310371.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0310371.20 + phase: 0 /partial
(1560 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29912.m005583 1-deoxyxylulose-5-phosphate synthase, putative 1713 0.0
29726.m003963 1-deoxyxylulose-5-phosphate synthase, putative 66 7e-10
29235.m000235 1-deoxyxylulose-5-phosphate synthase, putative 58 2e-07
>29912.m005583 1-deoxyxylulose-5-phosphate synthase, putative
Length = 2154
Score = 1713 bits (864), Expect = 0.0
Identities = 1386/1560 (88%)
Strand = Plus / Plus
Query: 1 ggatttgttagtcggatatgttctgtacctgaccttgatgatatcttctgggagaaagtt 60
||||||||| |||| |||||||| || ||||| |||||||||||||| |||||||||||
Sbjct: 160 ggatttgttggtcgaatatgttcagtgcctgatcttgatgatatcttttgggagaaagtc 219
Query: 61 cctacgcccatacttgatgttgttgaaaaccctatccacttaaagaatttgacccttaag 120
||||| |||||||||||||| |||||||| ||||||||||| || |||||||| ||| ||
Sbjct: 220 cctacacccatacttgatgtggttgaaaatcctatccacttgaataatttgacacttcag 279
Query: 121 gaactgaaagaactggctgatgaaataagggcagaattgacatctataatgtcaagcact 180
||| ||||||| ||||| ||||||||| | | ||||||| |||||||||||||||| |||
Sbjct: 280 gaattgaaagagctggcagatgaaatacgagaagaattgtcatctataatgtcaaggact 339
Query: 181 caaaaatctttgaaggcaagtttagctgtggtggaactgacggttgctattcattatatt 240
|||||| | || ||||| |||||||| || || || |||| |||||||||||| || ||
Sbjct: 340 caaaaagcctttaaggccagtttagcagttgttgagttgacagttgctattcatcatgtt 399
Query: 241 ttccatgctccagtggacaagatactatgggatgttggagaacagacatatgcgcataaa 300
|| ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 400 tttcatgctccagtggacaaaatactatgggatgttggggaacagacatatgcacataaa 459
Query: 301 attctcacaggaaggcggtcccttatgcacacgctaaggcaaaagaatggtctttcaggc 360
|||||||||||||| ||||| |||||||| || || || ||||||||||||||||| ||
Sbjct: 460 attctcacaggaagacggtctcttatgcatacactgagacaaaagaatggtctttctggt 519
Query: 361 tttacatctcgatctgagagtgaatatgatccatttggggcagggcatggatgcaatagt 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 520 tttacatctcagtctgagagtgaatatgatccatttggggcagggcatggatgcaacagt 579
Query: 421 atatctgctgggcttgggatggcagttgcacgtgatataaaaggaaaaagagaacgtgtt 480
| |||||||||||||| ||||||||||| ||||| || ||||| ||| |||||||||||
Sbjct: 580 gtttctgctgggcttggaatggcagttgcgcgtgacatgaaagggaaacgagaacgtgtt 639
Query: 481 gttacagtcattagcaatgggacaactatggctggtcaggtttatgaagcaatgagcaat 540
||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 640 gttacagtcatcagcaatggaacaactatggctggtcaggtctatgaagcaatgagcaat 699
Query: 541 gctggctatttggactcaaatatgatagtaattttaaatgacagccgtcactctttgcac 600
|| |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 700 gcaggctatatagactcaaatatgatagtcattttaaatgacagccgtcactctttgcac 759
Query: 601 ccaaagattgaagagggccctaagacttcaatcactgctctatctagtaccctaagcaag 660
|||||||||||||||||||| |||||||| | | ||||||||| |||||| |||| | |
Sbjct: 760 ccaaagattgaagagggccccaagacttcgttaaatgctctatccagtaccttaagtagg 819
Query: 661 ctccagtcaagtaaatcattcagaaggtttagagaagttgcaaagggtgttaccaagagg 720
||||||||||||||||||||| | | ||||||||||| ||| ||||||||||||||||||
Sbjct: 820 ctccagtcaagtaaatcattccggaagtttagagaagctgccaagggtgttaccaagagg 879
Query: 721 attggtatgggcatgcatgaattagcagccaaagttgatgagtatgcacgtggtatgatc 780
||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 880 attggtaggggtatgcatgaattagcagccaaagttgacgagtatgcacgtggtatgata 939
Query: 781 ggtcctccaggttcgactctttttgaggaacttggtctgtactacataggtcctgttgat 840
||||||| ||| || ||||||||||| ||||||||| |||| |||||||| |||||||||
Sbjct: 940 ggtcctctaggatcaactctttttgaagaacttggtttgtattacataggccctgttgat 999
Query: 841 ggacacagcattgaggacctagtttgtgttctacaagaagtggcgtctctagattcaatg 900
||||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 1000 ggacacaacattgaagacctagtttgcgttctacaagaagtggcatctctagattcaatg 1059
Query: 901 ggtcctgtcttggtacatgtaataacagaagaaaatcggggactagaagataaggaaagg 960
|||||||| ||| |||||||| |||||||||||||||| || ||| ||||| |||
Sbjct: 1060 ggtcctgttttgatacatgtagtaacagaagaaaatcgacgaagagataataagcaaaaa 1119
Query: 961 agtgagtcattggagaacctgcaggaaggttcatgtaagtctgattcttctctttacagt 1020
| ||| |||| |||||||| ||||||||||| |||| |||||| | | | | || |||
Sbjct: 1120 attgacacattagagaacctacaggaaggttccagtaactctgatccatttttgtatagt 1179
Query: 1021 attcacactcgaacttatagtgactgctttgttgaggctttgtttatggaggcagagaag 1080
||||| |||||||| ||||| || ||||| || ||||| ||| |||||||||||||||||
Sbjct: 1180 attcatactcgaacctatagcgattgcttcgtagaggcgttgattatggaggcagagaag 1239
Query: 1081 gacaaagatatcgtgattgttcacgcaggaatggaaatggaaacagcttttcaacgaatt 1140
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 1240 gacaaagatatcgtgattgttcatgcaggaatggaaatggaaacagcttttcaactgatt 1299
Query: 1141 caagaaagatttcctgacagattttttgatgtggggatggctgagcagcatgcagttaca 1200
|| ||||||| ||| |||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 1300 caggaaagatatccagacagattttttgatgtgggaatggctgagcagcatgcagtgaca 1359
Query: 1201 ttttctgctggtttatcctgtggaggtttgaagccattttgcattatcccttctgccttc 1260
||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||| ||||
Sbjct: 1360 ttttctgctggtttatcttgtgggggtttgaagccattctgcataatcccttctaccttt 1419
Query: 1261 ctacagagagcatatgaccaggtgatccatgatgtagaccagcagaagattccagttcgt 1320
||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||
Sbjct: 1420 ctacaaagagcatatgaccaggtggtccatgatgtagatcagcagcggattccagttcgt 1479
Query: 1321 tttgtaattcctagtgcaggattggtggggtctgatggtcccatgcagtgtggggcattc 1380
||||| ||| | ||||||||||| || |||||||||||||| ||||| ||||| |||||
Sbjct: 1480 tttgtcattacaagtgcaggattagtagggtctgatggtcctatgcaatgtggtgcattt 1539
Query: 1381 gatataacattcatgtcttgcttgccaaacatgattgttatggcgccatctgatgaggat 1440
|||||||||||||||||||| || |||||||||||||||||||| ||||| |||||||||
Sbjct: 1540 gatataacattcatgtcttgtttaccaaacatgattgttatggcaccatcggatgaggat 1599
Query: 1441 gagcttgtggacatggtggctactgcagcctgcattgatgatcgtccagtctgcttccgt 1500
|||||||||||||||||||||||||||| |||||||||| |||||| |||||||||
Sbjct: 1600 gagcttgtggacatggtggctactgcagttcaaattgatgatcatccagtatgcttccgt 1659
Query: 1501 tatccaaggggtgctattattgggacagaccattatacacgcagtggaattccaattgag 1560
|||||||||||||| ||| | |||||||||||||||| || | ||||||||| ||||||
Sbjct: 1660 tatccaaggggtgccattgtggggacagaccattatatgcgtattggaattccgattgag 1719
>29726.m003963 1-deoxyxylulose-5-phosphate synthase, putative
Length = 2163
Score = 65.9 bits (33), Expect = 7e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 691 agagaagttgcaaagggtgttaccaagaggattggtatgggcatgcatgaattagcagcc 750
||||| ||||| ||||||||||| ||| |||||||| ||||||||||| |||||
Sbjct: 847 agagaggttgctaagggtgttacaaagcggattggtggacctatgcatgaattggcagca 906
Query: 751 aaagttgatgagtatgcacgtggtatgat 779
||||||||||| ||||||||||| |||||
Sbjct: 907 aaagttgatgaatatgcacgtgggatgat 935
>29235.m000235 1-deoxyxylulose-5-phosphate synthase, putative
Length = 2145
Score = 58.0 bits (29), Expect = 2e-07
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 1369 tgtggggcattcgatataacattcatgtcttgcttgccaaacatgattgttatggcgcca 1428
||||| ||||| ||||| |||| |||| |||||||||| |||||| | || ||||| |||
Sbjct: 1519 tgtggagcatttgatatcacatacatggcttgcttgcccaacatggtggtcatggctcca 1578
Query: 1429 tctgatgaggatgagct 1445
|||||||| | ||||||
Sbjct: 1579 tctgatgaagctgagct 1595
Score = 54.0 bits (27), Expect = 3e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1165 tttgatgtggggatggctgagcagcatgcagttacattttctgctggttta 1215
||||||||||| || |||||||| ||||| ||||||||| | |||||||||
Sbjct: 1315 tttgatgtgggtattgctgagcaacatgccgttacatttgcagctggttta 1365