Jatropha Genome Database
- JcCA0310221.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0310221.10 - phase: 0
(783 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29176.m000138 ATP synthase subunit d, putative 799 0.0
29939.m000532 ATP synthase subunit d, putative 771 0.0
>29176.m000138 ATP synthase subunit d, putative
Length = 786
Score = 799 bits (403), Expect = 0.0
Identities = 675/765 (88%), Gaps = 3/765 (0%)
Strand = Plus / Plus
Query: 22 ttgaatgtagttcctacagtcactatgcttgctgtcatgaaagctcgccttgttggtgcc 81
|||||||||||||| ||||| || |||||||| || | |||||||||||| |||||||
Sbjct: 22 ttgaatgtagttcccacagtgacgatgcttgcagtagtaaaagctcgccttattggtgct 81
Query: 82 acaaggggtcatgcccttctgaagaagaaaagtgatgctttaactgtgcagttccgtcaa 141
||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 82 acaagaggtcatgctcttctcaagaagaagagtgatgctttaactgtgcagttccgtcaa 141
Query: 142 attctcaaaaagatcgtcactgcaaaagaatcaatgggagatataatgaagtcgtctgcg 201
||||| |||||||| ||| || | |||||||| |||||||| || |||||| | || ||
Sbjct: 142 attcttaaaaagattgtctctactaaagaatccatgggagagatcatgaaggcctcctcg 201
Query: 202 tttgctctcactgaagcgaaatatgttgcgggggagaatgttaagcatgttgtccttgag 261
|||||||| |||||||| || |||||||| || |||||||||||||||||||||||||||
Sbjct: 202 tttgctctaactgaagcaaagtatgttgctggtgagaatgttaagcatgttgtccttgag 261
Query: 262 aatgtccaaagtgcatctcttaaagttcgatctcggcaagaaaatgttgctggtgtgaag 321
|||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aatgtccagaatgcatcccttaaagttcgatctcggcaagaaaatgttgctggtgtgaag 321
Query: 322 ctgcctaagtttgagtatttcactgaaggtgagaccaagaatgacctcactgggttggcc 381
|||||||||| ||||||||||||||| |||| |||||||||||||| ||||| || |||
Sbjct: 322 ttgcctaagttcgagtatttcactgaaagtgataccaagaatgaccttactggattagcc 381
Query: 382 aggggcggccaacaggttcaggcgtgtcgtgctgcttatataaaatcaattgaagttctt 441
|| || |||||||| |||||||| ||||||||||||||| ||||||| ||||| |||||
Sbjct: 382 agaggtggccaacaagttcaggcctgtcgtgctgcttatgtaaaatctattgaggttcta 441
Query: 442 gttgagcttgcatcgcttcagacatcattcttaacactggatgaggcaatcaagacgaca 501
||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||| |||
Sbjct: 442 gttgagcttgcttcacttcagacatcattcttaacacttgatgaggcaattaagacaaca 501
Query: 502 aatcgtagggttaatgcactggagaatgttgtgaagcctagaatcgagaatacaataaat 561
|||||| |||||||||| |||||||||||||||||||||||| | ||||| ||||| | |
Sbjct: 502 aatcgtcgggttaatgctctggagaatgttgtgaagcctagactggagaacacaattagt 561
Query: 562 tatattaaaggagagttagatgaacttgaaagagaggatttcttcaggttaaagaaggta 621
|| |||||||| ||| | ||||| |||||||| ||||||||||||||| |||||||| ||
Sbjct: 562 tacattaaaggggagctggatgagcttgaaagggaggatttcttcaggctaaagaagata 621
Query: 622 cagggctacaagaagagagaaattgagagacagcttgcagctgcaaagcaatttgctgag 681
|| || ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 622 caaggttacaagaagagggaaattgagagacagcttgcagctgccaagcagtttgctgag 681
Query: 682 gagcagtttgcagagaaagtttctttgcagaaagggatttcgttaaagtcagctcataat 741
|| |||||||| |||||| |||||||||||||||| ||||| |||| |||||||| |||
Sbjct: 682 gaacagtttgctgagaaaatttctttgcagaaaggaatttccctaaaatcagctcacaat 741
Query: 742 ttgttgtcagtagca---gagaaggacgaggacataattttctga 783
||||||| | ||| |||||||| |||||||| |||||||||
Sbjct: 742 atgttgtctgctgcaatggagaaggatgaggacattattttctga 786
>29939.m000532 ATP synthase subunit d, putative
Length = 786
Score = 771 bits (389), Expect = 0.0
Identities = 623/701 (88%)
Strand = Plus / Plus
Query: 22 ttgaatgtagttcctacagtcactatgcttgctgtcatgaaagctcgccttgttggtgcc 81
|||||||||||||| || || || |||||||| || | ||||||||||||||||||||
Sbjct: 22 ttgaatgtagttcccactgtgacaatgcttgcggttgtaaaagctcgccttgttggtgct 81
Query: 82 acaaggggtcatgcccttctgaagaagaaaagtgatgctttaactgtgcagttccgtcaa 141
||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 82 acaagaggtcatgctcttctcaagaagaagagtgatgctttaactgtgcagttccgtcaa 141
Query: 142 attctcaaaaagatcgtcactgcaaaagaatcaatgggagatataatgaagtcgtctgcg 201
||||| |||||||| || || | ||||||||||||||||| || |||||| || ||
Sbjct: 142 attcttaaaaagattgtttctactaaagaatcaatgggagagatcatgaagagctcctcg 201
Query: 202 tttgctctcactgaagcgaaatatgttgcgggggagaatgttaagcatgttgtccttgag 261
|||||||| |||||||| || ||||| || || |||||||||||||||||||||||||||
Sbjct: 202 tttgctctaactgaagcaaagtatgtcgccggtgagaatgttaagcatgttgtccttgag 261
Query: 262 aatgtccaaagtgcatctcttaaagttcgatctcggcaagaaaatgttgctggtgtgaag 321
|||||||| | |||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 262 aatgtccataatgcatcccttaaagttcgatctcgacaagaaaatgttgctggtgtgaag 321
Query: 322 ctgcctaagtttgagtatttcactgaaggtgagaccaagaatgacctcactgggttggcc 381
||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || |||
Sbjct: 322 ttgcctaagtttgactatttcactgaaggtgaaaccaagaatgaccttactggattagcc 381
Query: 382 aggggcggccaacaggttcaggcgtgtcgtgctgcttatataaaatcaattgaagttctt 441
|| || |||||||| |||||||| ||||||||||||||| ||||||| || || |||||
Sbjct: 382 agaggtggccaacaagttcaggcctgtcgtgctgcttatgtaaaatctatcgaggttctc 441
Query: 442 gttgagcttgcatcgcttcagacatcattcttaacactggatgaggcaatcaagacgaca 501
||||||||||| || |||||||||||||| |||||||| ||||||||||||||||| |||
Sbjct: 442 gttgagcttgcttcacttcagacatcatttttaacacttgatgaggcaatcaagacaaca 501
Query: 502 aatcgtagggttaatgcactggagaatgttgtgaagcctagaatcgagaatacaataaat 561
||||| ||||||||||| ||||||||||||||||||||||| | ||||| ||||||| |
Sbjct: 502 aatcggcgggttaatgcattggagaatgttgtgaagcctagactggagaacacaataagt 561
Query: 562 tatattaaaggagagttagatgaacttgaaagagaggatttcttcaggttaaagaaggta 621
|| |||||||| ||| | ||||| |||||||| ||||||||||||||| |||||||| ||
Sbjct: 562 tacattaaaggggagctggatgagcttgaaagggaggatttcttcaggctaaagaagata 621
Query: 622 cagggctacaagaagagagaaattgagagacagcttgcagctgcaaagcaatttgctgag 681
||||| ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 622 cagggttacaagaagagggaaattgagagacagcttgcagctgccaagcagtttgctgag 681
Query: 682 gagcagtttgcagagaaagtttctttgcagaaagggatttc 722
||||||||||| |||||| |||||||||||||||| |||||
Sbjct: 682 gagcagtttgctgagaaaatttctttgcagaaaggaatttc 722