Jatropha Genome Database

JcCA0310141.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0310141.10 - phase: 0 /pseudo
         (427 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29709.m001232 metal ion binding protein, putative                     129   1e-29

>29709.m001232 metal ion binding protein, putative
          Length = 750

 Score =  129 bits (65), Expect = 1e-29
 Identities = 164/197 (83%)
 Strand = Plus / Plus

                                                                       
Query: 64  ataactgccgtctacagagttaacctgcattgcgagcaatgtgcacgggatatcaagaat 123
           |||||||| || |||| |||||||||||| ||| |||||||||| || |||||||| || 
Sbjct: 49  ataactgcagtatacaaagttaacctgcactgccagcaatgtgctcgagatatcaaaaag 108

                                                                       
Query: 124 cctcttatgaggacccggggtgtacacaacgtcgactttgatattgacaagtctgaaatc 183
           ||||||||||  |  |  || || |||||||| ||| ||||| || | ||| ||||||||
Sbjct: 109 cctcttatgaatatgcaaggagttcacaacgtggacgttgattttcagaaggctgaaatc 168

                                                                       
Query: 184 aaggttgaaggcgtgattgatgtaataaaagttcataaacaaatagagaaatttagccaa 243
           |||||| ||||||||||||||||||||||| | ||||| |||||||||||||  ||| | 
Sbjct: 169 aaggttaaaggcgtgattgatgtaataaaaatccataagcaaatagagaaatggagcaag 228

                            
Query: 244 agaaaggttgagctggt 260
           | |||||||||| ||||
Sbjct: 229 aaaaaggttgagatggt 245