Jatropha Genome Database

JcCA0309351.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0309351.20 - phase: 0 /partial
         (595 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30189.m001658 protein phosphatase 2c, putative                        426   e-119

>30189.m001658 protein phosphatase 2c, putative
          Length = 888

 Score =  426 bits (215), Expect = e-119
 Identities = 425/495 (85%)
 Strand = Plus / Plus

                                                                       
Query: 101 caggaaaagggaaaagtaaatcatcaaataaaaagatttctcatgggtttcaattggttg 160
           |||||||||| | |||||||||||||| ||||||||| || ||||| |||||  | || |
Sbjct: 101 caggaaaaggaagaagtaaatcatcaagtaaaaagatgtcacatggatttcagcttgtag 160

                                                                       
Query: 161 aaggaaaatccggccatgatatggaagattatcatgtggccgagtaccggaaattcaaga 220
           |||| ||||| || |||||||||||||| || ||||| || || || || ||| ||||||
Sbjct: 161 aaggcaaatcaggacatgatatggaagactaccatgttgctgaatatcgaaaaatcaaga 220

                                                                       
Query: 221 atcacgagcttggattatttgctatctttgatggtcatcttggggatcgagtccctagtt 280
           |||| |||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 221 atcatgagcttggcttatttgctatctttgatggtcatcttggggatcgtgttcctagtt 280

                                                                       
Query: 281 atttgaaagataatctattccttaacatccttcaagagccaaacttttgggatgacccta 340
           |||||||||| ||||| |||||||| || |||||||||||  | || |||||||||||||
Sbjct: 281 atttgaaagacaatcttttccttaatatacttcaagagccccagttctgggatgacccta 340

                                                                       
Query: 341 agactgcaattaaaaatgcctatagagccactgataagtacatattagacaattctatgc 400
           | ||||| ||||||||||| || | |  |||||||||||  |||||||| ||||||||||
Sbjct: 341 aaactgccattaaaaatgcttacaaaaacactgataagtttatattagagaattctatgc 400

                                                                       
Query: 401 aattggggcctggtggctctactgctgttactgctattgtaattgatggaaaagacttat 460
           ||||||| ||||| ||||| || || |||||||||||||| || ||||| || |||||||
Sbjct: 401 aattgggacctgggggctccaccgccgttactgctattgttatcgatggcaaggacttat 460

                                                                       
Query: 461 gggtggccaatgttggtgattctagagctgttgtatgtgaaagaggctgtgccaaccagc 520
           |||| |||||| | |||||||||||||||||||| ||||| ||||||| |||||| ||||
Sbjct: 461 gggttgccaatatcggtgattctagagctgttgtttgtgagagaggctctgccaatcagc 520

                                                                       
Query: 521 ttactgtggaccatgagccacacactgaacgtaaaaggatagaaaagcagggtggttttg 580
           ||||||| ||||||||||| |||||||| ||||| ||||| || ||||| ||||| ||||
Sbjct: 521 ttactgttgaccatgagccgcacactgagcgtaagaggattgagaagcaaggtggctttg 580

                          
Query: 581 ttacaactcttcctg 595
           | || || |||||||
Sbjct: 581 tcactacccttcctg 595