Jatropha Genome Database

JcCA0309311.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0309311.10 - phase: 0 /partial
         (266 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30028.m000254 triosephosphate isomerase, putative                     268   1e-71
27383.m000156 triosephosphate isomerase, putative                      80   7e-15

>30028.m000254 triosephosphate isomerase, putative
          Length = 357

 Score =  268 bits (135), Expect = 1e-71
 Identities = 213/239 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggcagaaagttcttcgtcggcggcaactggaaatgcaatggaacaactgaggaggtg 60
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1   atgggtagaaagtttttcgtcggcggcaactggaaatgcaatggaacaactgaggaggtt 60

                                                                       
Query: 61  aagaagatcgtcacaaccttgaacgaagctgaggtcccttctgaggatgttgtggaggtt 120
           |||||||| || || || ||||| ||||||||||| |||||||| || ||||| ||||||
Sbjct: 61  aagaagattgtgaccactttgaatgaagctgaggttccttctgacgacgttgttgaggtt 120

                                                                       
Query: 121 gttgtgagccctccctttgtatttcttccttttgtgaaaagtctgttgagacctgacttc 180
           ||  |||||||||| ||||||||||||||||| || |||||| | |||||||| ||||||
Sbjct: 121 gtcctgagccctccatttgtatttcttcctttggtcaaaagtttattgagacccgacttc 180

                                                                      
Query: 181 caggtagcagcacaaaactgctgggttcgcaaaggtggtgctttcaccggagaggttag 239
           ||||| |||||||||||||| |||||||||||||||||||| || || || ||||||||
Sbjct: 181 caggttgcagcacaaaactgttgggttcgcaaaggtggtgcctttactggggaggttag 239


>27383.m000156 triosephosphate isomerase, putative
          Length = 765

 Score = 79.8 bits (40), Expect = 7e-15
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgggcagaaagttcttcgtcggcggcaactggaaatgcaatggaacaactgaggaggtg 60
          |||| ||| ||||| ||||| |||||||||||||||||||||||||||| ||| || |||
Sbjct: 1  atggccaggaagtttttcgttggcggcaactggaaatgcaatggaacaagtgaagaagtg 60

                  
Query: 61 aagaagat 68
          ||||||||
Sbjct: 61 aagaagat 68