Jatropha Genome Database

JcCA0309221.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0309221.10 + phase: 0 /pseudo
         (543 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008741 UDP-N-acetylglucosamine transferase subunit alg13,...   424   e-118

>30128.m008741 UDP-N-acetylglucosamine transferase subunit alg13,
           putative
          Length = 537

 Score =  424 bits (214), Expect = e-118
 Identities = 408/470 (86%), Gaps = 2/470 (0%)
 Strand = Plus / Plus

                                                                       
Query: 71  ttcgatgctcttgtgagagcggtggatacaagggaagttaaacaaagaattgtttagaag 130
           |||||||||||||| ||||| |||||||||  | ||||||| ||   |||||||||||| 
Sbjct: 67  ttcgatgctcttgtaagagcagtggatacagagcaagttaagcagc-aattgtttagaaa 125

                                                                       
Query: 131 agggtatactcatctccttattcaaaatgggtcgaggatcttatacgcccaccaagtctg 190
           ||| ||||| ||||| |||||||||| ||||||| |||||||| || || |||||| | |
Sbjct: 126 aggatatacccatcttcttattcaaa-tgggtcgtggatcttacactcctaccaagacgg 184

                                                                       
Query: 191 aaggagaagatggatctgttgccgtcgactacttcactttttcatcaagtatcgcggacc 250
           ||||||||||||| ||| | || || || |||||||| |||||||||||||| || ||||
Sbjct: 185 aaggagaagatggttctctcgctgttgattacttcacattttcatcaagtattgccgacc 244

                                                                       
Query: 251 atctaagatcagcatctcttgtcatcagtcatgcagggtcaggaagtatatttgaaactc 310
           |||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||||
Sbjct: 245 atctaagatcagcatctcttgtcatcagtcatgctggctcagggagtatatttgagactc 304

                                                                       
Query: 311 tgcggctccataaacccttaattgtagtggttaatgaagatttgatggacaatcatcaaa 370
           |||| || || ||||| |||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 305 tgcgccttcagaaaccattaattgtcgtggtgaatgaagatttgatggacaatcaccaaa 364

                                                                       
Query: 371 ctgaacttgcagaagaacttgcggaaaggaagcatttatattgtgctcgtcctcaaacaa 430
            |||||||||||||||||| || || |||||| |||||||||||||||||||||||||| 
Sbjct: 365 gtgaacttgcagaagaactagcagagaggaagtatttatattgtgctcgtcctcaaacac 424

                                                                       
Query: 431 ttcatcatacaatagccgatatggatttagaatcgcttcttccataccctgctggtgatg 490
           ||||||||| ||| || ||||||||||| || || |||||||| ||| |||| || ||||
Sbjct: 425 ttcatcatataattgcagatatggatttggagtctcttcttccttactctgcaggagatg 484

                                                             
Query: 491 caaccccggttgccaaacttataaataggtttcttggtttccctgatgat 540
           ||||||| |||| ||| ||||||||||| ||||| |||||||| ||||||
Sbjct: 485 caacccctgttgtcaagcttataaatagatttctaggtttcccagatgat 534