Jatropha Genome Database
- JcCA0309141.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0309141.10 - phase: 0 /pseudo/partial
(699 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29628.m000748 isocitrate dehydrogenase, putative 343 9e-94
>29628.m000748 isocitrate dehydrogenase, putative
Length = 1119
Score = 343 bits (173), Expect = 9e-94
Identities = 242/265 (91%)
Strand = Plus / Plus
Query: 349 ctgaacaacaggaagaaagtgactgctgtgcataaggcaaacatcatgaagcttgcagat 408
|||||||| |||||||||||||||||||| || || ||||| |||||||||||||| |||
Sbjct: 583 ctgaacaataggaagaaagtgactgctgttcacaaagcaaatatcatgaagcttgctgat 642
Query: 409 ggtttgttcttggaatcttgtcgggaagtctcttcaaaatatcctggaatcaaatataat 468
|| | |||||||||||||||||||| || || ||||||||||||| ||||| ||||||
Sbjct: 643 ggcctcttcttggaatcttgtcgggaggttgctacaaaatatcctggtatcaagtataat 702
Query: 469 gaaattattgtggataactgctgtatgcaacttgtttcaaagccagagcaatttgatgtc 528
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 703 gaaattattgtggataactgctgcatgcaacttgtttcaaagccagagcagtttgatgtc 762
Query: 529 atggtgacacctaatctttatgggaatcttgttgcaaatacagctgcaggtattgctggt 588
|||||||||||||| |||||||| ||| | ||||||||||||||||||||||||||||||
Sbjct: 763 atggtgacacctaacctttatggcaatttagttgcaaatacagctgcaggtattgctggt 822
Query: 589 ggcacgggagtcatgccaggaggta 613
|| || |||||||||||||||||||
Sbjct: 823 ggtacaggagtcatgccaggaggta 847
Score = 272 bits (137), Expect = 3e-72
Identities = 293/345 (84%)
Strand = Plus / Plus
Query: 3 gttgagcaagtgatggaggcgatgcacgcaccggtttatttcgaacgctatgagattcac 62
||||||||||| ||||| |||||||||||||| || |||||||| | || || | |||
Sbjct: 181 gttgagcaagtaatggaagcgatgcacgcaccagtgtatttcgagagatacgaagtacac 240
Query: 63 ggcgacatgaaaaaggtgccgccggaggtcatcgagtcgattaagaaaaataaggtttgt 122
|| ||||||||||| ||||| ||||||| || |||||||| ||||| |||||||| |||
Sbjct: 241 ggagacatgaaaaaagtgccagcggaggtgatagagtcgataaagaagaataaggtgtgt 300
Query: 123 ttgaaaggaggattagcaactcccatgggcggtggtgttagttccttgaatgtgcagttg 182
||||||||||||||||||| || ||||| || || || ||||| |||||||||||| |
Sbjct: 301 ctgaaaggaggattagcaacaccgatgggaggaggagtgagttcgttgaatgtgcagcta 360
Query: 183 aggaaagagcttgatttgtacgcttcgctcgttaattgctttaatttgcctggattgcca 242
||||| ||||||||||||||||||||||| || ||||| || ||||| || |||||||||
Sbjct: 361 aggaaggagcttgatttgtacgcttcgcttgtgaattgtttcaatttaccaggattgcca 420
Query: 243 acccgccatgaaaatgttgatattgttgtgattagggagaacactgaaggagaatactct 302
|| | ||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct: 421 actagacatgaaaatgttgatattgttgttattagagagaacactgaaggtgaatattca 480
Query: 303 ggtctcgagcacgaggtcgttcctggtgttgttgaaagccttaag 347
||||| || || || || || ||||||||||| ||||||||||||
Sbjct: 481 ggtcttgaacatgaagttgtccctggtgttgtcgaaagccttaag 525