Jatropha Genome Database
- JcCA0308991.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0308991.10 - phase: 0 /partial
(634 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28093.m000125 conserved hypothetical protein 638 0.0
29863.m001061 conserved hypothetical protein 281 2e-75
30170.m014026 conserved hypothetical protein 60 2e-08
29912.m005506 conserved hypothetical protein 58 7e-08
>28093.m000125 conserved hypothetical protein
Length = 777
Score = 638 bits (322), Expect = 0.0
Identities = 466/514 (90%)
Strand = Plus / Plus
Query: 121 atgactggatgtgtcgttcttttccccatagctgtgacattctttattacatggtggctt 180
|||||||||||||| || ||||||||||| || ||||||||||| |||||||||||||||
Sbjct: 163 atgactggatgtgttgtacttttccccattgccgtgacattcttcattacatggtggctt 222
Query: 181 attcagtttgttgatggtttcttcagtccaatttatgaacggcttggcattgacatattt 240
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 223 attcagtttgttgatggtttctttagtccaatatatgaacggcttggcattgacatattt 282
Query: 241 ggacttggatttgtcacatctctggtgtttgtattctttgtcggtgtatttgtttcgtca 300
||||| |||||||| |||||| ||||||||||||||||||| ||||| |||||||||||
Sbjct: 283 ggactcggatttgtgacatctttggtgtttgtattctttgttggtgtttttgtttcgtcg 342
Query: 301 tggatagggtccaatgttttctggcttggcgaatggttcatcaagcgaatgccctttgtt 360
|||||||| || ||||||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 343 tggataggctctaatgttttctggcttggagaatggttcataaagcgaatgccgtttgtt 402
Query: 361 aggcacttatattcggcatccaagcaaattagtgctgctatttctccagctcagaacact 420
| |||||||||||| || |||||||||||||||||||| ||| |||||| ||||| |||
Sbjct: 403 aagcacttatattcagcgtccaagcaaattagtgctgcgattgctccagaccagaatact 462
Query: 421 acagcattcaaagaggttgcaattatccgtcatcctcgtattggtgaatatgcatttggt 480
|||||||| |||||||||||||| || |||||||||||| ||||||||||||||||||||
Sbjct: 463 acagcatttaaagaggttgcaataattcgtcatcctcgtgttggtgaatatgcatttggt 522
Query: 481 ttcatcacatcaactgtcatccttcagagagataacgaagatgaagaattatgcagtgtt 540
|| ||||| ||||| ||||||||||||| || || || ||||| || |||||||| |||
Sbjct: 523 tttatcacttcaacagtcatccttcagaaggagaatgaggatgaggagttatgcagcgtt 582
Query: 541 tttgtcccaacaaaccatctgtacattggtgatatattccttgtgaactctaaagacatt 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 583 tttgtcccaacaaaccatctatacattggtgatatattccttgtgaactctaaggagatc 642
Query: 601 ataagacccaatttgtcgatccgagaaggcatag 634
|||||||| ||| |||| ||||||||||||||||
Sbjct: 643 ataagaccaaatctgtcaatccgagaaggcatag 676
Score = 83.8 bits (42), Expect = 1e-15
Identities = 96/114 (84%)
Strand = Plus / Plus
Query: 7 gaagaaaaagaagaatctacgtctattccgctcagccacgccgaaaatggcggcgaagaa 66
||||| ||||| ||||| || || ||||| || |||| | ||||||||| | |||| ||
Sbjct: 7 gaagagaaagacgaatcaacctccattccacttagccgccccgaaaatgtctgcgaggat 66
Query: 67 cccgaggatcccgccaaatctcctccttcctcctccaattcctccactcgcgag 120
|| |||||||| ||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 67 cctgaggatcctgccaagtctcctccttcctcttctaattcctccactcgcgag 120
>29863.m001061 conserved hypothetical protein
Length = 795
Score = 281 bits (142), Expect = 2e-75
Identities = 385/466 (82%)
Strand = Plus / Plus
Query: 169 acatggtggcttattcagtttgttgatggtttcttcagtccaatttatgaacggcttggc 228
||||||||| ||||||| ||||||||||||||||| |||||| |||||| |||||
Sbjct: 211 acatggtggtttattcaatttgttgatggtttctttagtccactttatgccaaacttggt 270
Query: 229 attgacatatttggacttggatttgtcacatctctggtgtttgtattctttgtcggtgta 288
||||||| ||||| ||||| ||||| || || || | || ||||||||||||||||
Sbjct: 271 gttgacatctttggtcttgggtttgttacttcattgcttttcatattctttgtcggtgtc 330
Query: 289 tttgtttcgtcatggatagggtccaatgttttctggcttggcgaatggttcatcaagcga 348
|||| ||| || ||||| || | | |||||||||| |||| ||||||||||| ||||||
Sbjct: 331 tttgcttcttcgtggatgggtgctactgttttctgggttggtgaatggttcattaagcga 390
Query: 349 atgccctttgttaggcacttatattcggcatccaagcaaattagtgctgctatttctcca 408
||||| ||| | | |||| | ||||| || ||||| ||||||||||||||| |||||||
Sbjct: 391 atgccttttatgaagcacatttattctgcttccaaacaaattagtgctgctgtttctcct 450
Query: 409 gctcagaacactacagcattcaaagaggttgcaattatccgtcatcctcgtattggtgaa 468
| || || || || || || ||||||||||| ||||| |||||||| || |||||||
Sbjct: 451 gaccaaaatacaactgcttttaaagaggttgctattattcgtcatccgcgacatggtgaa 510
Query: 469 tatgcatttggtttcatcacatcaactgtcatccttcagagagataacgaagatgaagaa 528
|||||||| ||||||||||||||| |||||||||||||||||||| | | |||||||||
Sbjct: 511 tatgcattcggtttcatcacatcatctgtcatccttcagagagatgatggagatgaagag 570
Query: 529 ttatgcagtgtttttgtcccaacaaaccatctgtacattggtgatatattccttgtgaac 588
||||||| |||| |||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 571 ctatgcagcgtttatgtcccaacaaaccatctgtacattggtgacatatttcttgtcaat 630
Query: 589 tctaaagacattataagacccaatttgtcgatccgagaaggcatag 634
|| | || || |||||||| || ||||| || |||||||||||||
Sbjct: 631 tcagaggagatcataagaccaaacttgtctattcgagaaggcatag 676
>30170.m014026 conserved hypothetical protein
Length = 804
Score = 60.0 bits (30), Expect = 2e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 368 tatattcggcatccaagcaaattagtgctgctatttctccagctcagaacacta 421
||||||| ||||| ||||||||||||||||| || ||||||| ||||| |||||
Sbjct: 431 tatattctgcatcaaagcaaattagtgctgcaatatctccagatcagaccacta 484
>29912.m005506 conserved hypothetical protein
Length = 729
Score = 58.0 bits (29), Expect = 7e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 172 tggtggcttattcagtttgttgatggtttcttcagtccaatttatgaacggcttggcatt 231
|||||| ||||||| |||||||||||||| ||| |||||| |||| | ||||| |||
Sbjct: 247 tggtggtttattcactttgttgatggttttttctctccaatctatgcccaacttggaatt 306
Query: 232 gacatatttggacttggattt 252
|| |||||||| |||||||||
Sbjct: 307 gatatatttggtcttggattt 327