Jatropha Genome Database

JcCA0308831.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0308831.20 + phase: 0 
         (369 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29739.m003743 Adipocyte plasma membrane-associated protein, puta...   135   2e-31

>29739.m003743 Adipocyte plasma membrane-associated protein,
           putative
          Length = 1071

 Score =  135 bits (68), Expect = 2e-31
 Identities = 248/308 (80%)
 Strand = Plus / Plus

                                                                       
Query: 49  cttgcttttatccttcagatcttcttcttctctcccatatctcccgacttgcttgaactg 108
           |||||||||||  |||| || | || ||| || |||||||| |||||||||||| |||||
Sbjct: 49  cttgcttttatatttcaaatatactacttttcccccatatcacccgacttgcttcaactg 108

                                                                       
Query: 109 cctccagctacttcgcttcccacaaataagcgcttacaggaagtgattagacttggagaa 168
           ||| || ||  ||  |||||  |||| ||||  |||||||||||||||| ||| ||||||
Sbjct: 109 cctgcacctttttttcttcctccaaacaagcagttacaggaagtgattaaactcggagaa 168

                                                                       
Query: 169 ggaacattggaaggtccagaggatgtctgtgtggacagagatggtgtattgtatacagca 228
           |||    |  |||| || |||||||||||  |||||| ||||||||||||||| ||||||
Sbjct: 169 ggatttatacaagggcctgaggatgtctgcatggacaaagatggtgtattgtacacagca 228

                                                                       
Query: 229 agtagagatggttggatcaaaagattgcatagtaacggaacctgggacaattggaagaaa 288
             ||| |||   |||||||||||| ||||||  || ||| ||||||| |||||||||| |
Sbjct: 229 gttagggataaatggatcaaaagaatgcataagaatggatcctgggagaattggaagaga 288

                                                                       
Query: 289 atagacagtaatggtttgcttggtatcacaatctcaaaggaaggtggtcttattgtctgt 348
           ||||||||  |||  |||||||| ||| |   ||| ||||||||||| |||||||| |||
Sbjct: 289 atagacagcgatgccttgcttggcatcgctccctccaaggaaggtggacttattgtttgt 348

                   
Query: 349 gatgctga 356
           ||||||||
Sbjct: 349 gatgctga 356