Jatropha Genome Database

JcCA0308351.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0308351.20 - phase: 0 /pseudo/partial
         (660 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001442 dihydrodipicolinate synthase, putative                  496   e-140

>29830.m001442 dihydrodipicolinate synthase, putative
          Length = 1104

 Score =  496 bits (250), Expect = e-140
 Identities = 454/522 (86%)
 Strand = Plus / Plus

                                                                        
Query: 139  attatttacaatgtgccatcacgaactggccaagatattcctccaggtgtgatacacagt 198
            |||||||| ||||| |||||  |||||||||||||||| || ||| ||||||| |||| |
Sbjct: 580  attatttataatgtcccatccagaactggccaagatatacccccatgtgtgattcacact 639

                                                                        
Query: 199  gcagcacaaagtccaaacttggcaggtgttaaagaatgcatgggtaatgatcgggtggaa 258
              |||||| ||||| |||||||||||||| || |||||  | ||||||||||||||||||
Sbjct: 640  atagcacagagtccgaacttggcaggtgtgaaggaatgtgttggtaatgatcgggtggaa 699

                                                                        
Query: 259  cagtacacagagaaaggaattgtggtatggagtgggaatgatgatgaatgccatgatgct 318
             | ||||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||
Sbjct: 700  gaatacacagagaaaggaattgtggtgtggagtgggaatgatgatcagtgccatgattct 759

                                                                        
Query: 319  agatggagccatggggctaccggagtgatttctgttgctagcaacttagtcccaggctta 378
            || |||| |||||| ||||| ||||| || |||||| |||||||||| ||||| ||||||
Sbjct: 760  aggtggaaccatggagctactggagtaatatctgttactagcaacttggtcccgggctta 819

                                                                        
Query: 379  atgcgcaagctcatgatcgaggggaaggaccctgcactaaattcaaaacttttgcctctc 438
            |||||  | ||  || | ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 820  atgcgacaacttgtgtttgaggggaagaaccctgcactgaattcaaaacttttgcctctc 879

                                                                        
Query: 439  atacgatggcttttccaagagccaaaccctattggtttgaacacagctctggcacaactt 498
            |||   ||||| || || ||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 880  atagattggctgtttcaggagcccaaccctattggattgaacacagctcttgcacaactt 939

                                                                        
Query: 499  ggagtcgtgagaccagttttcaggctgccatatgtacctcttcctctgccaaagaggata 558
            |||||||||||||||||||||||||| ||||||||||||||||||||| || ||||| ||
Sbjct: 940  ggagtcgtgagaccagttttcaggctaccatatgtacctcttcctctggcacagagggta 999

                                                                        
Query: 559  gaatttgtgaatttggtcaaggcaattgggcgtgagaattttgtaggagaacaagatgtc 618
            || ||||||||||| || |||||||| |||||||||||||||||||||||| ||||||| 
Sbjct: 1000 gagtttgtgaatttagtgaaggcaatagggcgtgagaattttgtaggagaaaaagatgtt 1059

                                                      
Query: 619  caggttctcgaggacgacgacttcatgttggtaggtcggtat 660
            |  ||||| || || ||||||||||| ||| |||||||||||
Sbjct: 1060 cgagttctggacgatgacgacttcatattgataggtcggtat 1101