Jatropha Genome Database
- JcCA0308171.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0308171.20 + phase: 0
(1767 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29739.m003663 electron transporter, putative 1312 0.0
>29739.m003663 electron transporter, putative
Length = 1770
Score = 1312 bits (662), Expect = 0.0
Identities = 1422/1674 (84%), Gaps = 6/1674 (0%)
Strand = Plus / Plus
Query: 88 gggtttgggtttatactgccgatgaatttgggaagttctattcataaatatttatggagg 147
|||||||| ||| | ||||| || ||| | |||||||| ||||||||||||||||||| |
Sbjct: 94 gggtttggctttgttctgccaataaatataggaagttcaattcataaatatttatggaag 153
Query: 148 agtggtaggtt---gtctgctcgatctatttcttctggagatgggtctccttcttcaatt 204
| ||||||| | ||| ||||||||||||||||| ||| || |||||||| ||||
Sbjct: 154 actggtaggatagtgtccagtcgatctatttcttctgcagacggctctccttc---aatt 210
Query: 205 tctgattttgaggatattaaatccctgggcaaaataagtggaaaaatgaatggtgggaac 264
|||||| ||||||||| |||| |||||| |||| ||||||| || |||| ||||||||
Sbjct: 211 tctgatcttgaggatactaaacccctggataaaagaagtggacaattgaaaggtgggaat 270
Query: 265 acgtctttttacagataccagcttgaggaagatgtaaagaagttgcaacaacagttgcaa 324
| |||| |||| ||||||||||| ||||||||||| || ||||||||||| || ||||||
Sbjct: 271 atgtctctttatagataccagctcgaggaagatgtcaaaaagttgcaacagcaattgcaa 330
Query: 325 gaagagattaatttgcgcctagctctagcaagtgctgttgaccacactgattcatccttc 384
||||||||| ||||||||||||||||||||||||||||||| ||| | |||||||||||
Sbjct: 331 gaagagattgatttgcgcctagctctagcaagtgctgttgaacactccaattcatccttc 390
Query: 385 tcaggttcaccttgtcacctaccagataaggcccaagagcttttagatagcatagctatt 444
|| ||||||||| ||| || ||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 391 tccagttcaccttatcagcttccagataaggcccaagaacttttggatagtatagctatt 450
Query: 445 ctggagataactgtatcaaagcttgaacaagaatcggttgccttaaaatgtcaacttagt 504
|| ||||| ||||||| ||||| ||||||||||| ||| | || ||| | | ||||||
Sbjct: 451 ctagagattgctgtatctaagctcgaacaagaatcagtttctttgcaatatgagcttagt 510
Query: 505 caggagagaaatgagcgtcatcttgctgagtaccatttaaggcatttgccctgtccagta 564
|| |||||||||||||| | ||||||||||||| |||||||||||| |||| || |
Sbjct: 511 caagagagaaatgagcgccgtcttgctgagtactggttaaggcatttggcctgctcaaca 570
Query: 565 tcatcaccagttgacaactctcaggcttgtttaacagaactgatcaggagaccttgcagt 624
|| ||| || | ||| |||||| ||||| ||||||| ||| |||||||||||||||
Sbjct: 571 tcctcatcattggactcctctcacacttgtataacagagatgagcaggagaccttgcagc 630
Query: 625 ggagagaaagtacaagggaaagtggaggataagccccccaagtccgatgtaaatggaaat 684
|| ||||| | ||| ||||||||||||||||||||| | |||||||| || |
Sbjct: 631 aaagtgaaaggaggaggcaaagtggaggataagcccccctggatagatgtaaaaagagag 690
Query: 685 ctgaatcgagttcatcttgttgacagactttggcaccaccctaaccgactttctgaagaa 744
| ||| | | ||| ||||||| | |||||| ||||| || || | ||||||||||||
Sbjct: 691 ccaaatagggaccattttgttgagaaactttgtcaccatccgaatcagctttctgaagaa 750
Query: 745 atggtcttgtgcatgagagatatatttatcttcttagcagattcttccaagctcacttct 804
||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| |||||
Sbjct: 751 atggtcttgtgcatgagagatatttttattttcttagcagattcttccaacctctcttct 810
Query: 805 tctgagggtatggcctcaccatattcaccgcaggggcacctctcctactcttctttggca 864
||||| | | ||| | |||| |||||| || ||||||||||| |||||||||||||||
Sbjct: 811 tctgactgcacggctttcccatcttcacctcaagggcacctctcttactcttctttggca 870
Query: 865 tctttctcagactcaccaataatgaattcatttatgaagagtccgtcaattgacgtggaa 924
|||||| ||||||| || | |||||||||||||||||||||| | | |||| | | |
Sbjct: 871 tctttcccagactcgcctacaatgaattcatttatgaagagtgccacggttgagattgca 930
Query: 925 aatggttctgatgacactgcaagatattgcaagctggatccatatagtgttcctggtaaa 984
||| || ||| | | ||||||||||||||||| | ||||| |||||| ||||||||||
Sbjct: 931 catgattttgaagtctctgcaagatattgcaaggttgatccttatagtcttcctggtaag 990
Query: 985 gtagattggatacaaggcgttggagcctacagtacggcagttgaggtctcatggttatct 1044
|||||||||||| ||||| |||||||||| | || |||| ||| ||||| ||||| |||
Sbjct: 991 gtagattggatagaaggcattggagcctatactaaagcagctgaagtctcttggttgtct 1050
Query: 1045 gttggaaagaaagaacttgaatatgcttctggggctctcaaaagatttaggttcctggtc 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1051 gttggaaagaaagaacttgaatatgcttctggggctctcaaaagatttaggttacttgtt 1110
Query: 1105 gagcagctagctgaagttgacccatctcacctgtcttgcaatgagaagctggcattttgg 1164
|||||| ||||||||||||| ||| || |||| ||| | |||||| |||||||||||
Sbjct: 1111 gagcagttagctgaagttgatccagctagcctgagttgtagtgagaaaatggcattttgg 1170
Query: 1165 attaatgtgtataatgctttgatcatgcatgcctttctagcttatggcattcccagaagt 1224
||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||
Sbjct: 1171 attaatgtgtataatgctttgatcatgcatgcctttctagcatatggagttccaagaagt 1230
Query: 1225 gatattaaattattctccttaatgcagaaggctgcttacaccatcggaggtcactcattc 1284
||||| ||||| || |||||||||||||||||||| || ||||||||||| | |||||||
Sbjct: 1231 gatatgaaattgttttccttaatgcagaaggctgcatataccatcggaggacgctcattc 1290
Query: 1285 agtgctgccgacattgagttcatcattctgaagatgaaacctccagctcatcgcccacaa 1344
|||||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 1291 agtgctgctgacattgagtttggtattttgaagatgaaacctccagcccatcgcccacaa 1350
Query: 1345 atagccttgctactcgctcttcaaaaatttaaggtaactgaggagcagaacttttctatc 1404
|||||||||||||| ||||||||||||||||||||||||||||||| ||| || ||| |
Sbjct: 1351 atagccttgctacttgctcttcaaaaatttaaggtaactgaggagccgaagttctctgtt 1410
Query: 1405 gatcaacctgagcctctcctggcttttgctctgagttgtggaatgcattcttcaccagca 1464
||||||| ||| |||||||||||||||||| | |||||||| ||||||||||||||||||
Sbjct: 1411 gatcaacatgaacctctcctggcttttgctttaagttgtgggatgcattcttcaccagca 1470
Query: 1465 gtgcgagtcttcactcctggaaatgtgaacgagttgcttaaaacttcattgaaggattat 1524
|| ||| ||||||| || | |||||| || || ||||| ||||||||||| |||||||||
Sbjct: 1471 gtacgaatcttcacgccagaaaatgtaaaagatttgctcaaaacttcattaaaggattat 1530
Query: 1525 gtgcaagcgtctgttggtataagtagtaagggtaaactgttggtgccaaagttgttgtat 1584
|||||||| |||||||||||||| ||||| |||||| | |||||||||||||||||||||
Sbjct: 1531 gtgcaagcatctgttggtataagcagtaaaggtaaagtattggtgccaaagttgttgtat 1590
Query: 1585 tgttttgccaaaggcacagtggatgacttacagttgcctgagtggatttgccagttcctc 1644
|||||||| ||||||| ||||| ||||| ||| | |||||||||||||||||||| |||
Sbjct: 1591 tgttttgcaaaaggcattgtggaggacttgcagcttcctgagtggatttgccagtttctc 1650
Query: 1645 tcgccagagcaagcagctatggttaaagattgttcatctaaccacaaatggaggctcctt 1704
|| || |||||||| || |||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 1651 tcccctgagcaagctgccatggttaaagattgtttatctaaccacaagtggaggctcctt 1710
Query: 1705 ggctctaaaagcttctctgtcctgcattttgattcaaggttccgctttcttttc 1758
|| || |||||||||||| |||| ||||||||||||||||| || ||||||
Sbjct: 1711 ggtgctcgaagcttctctgttctgccatttgattcaaggttccgtttccttttc 1764