Jatropha Genome Database

JcCA0308171.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0308171.10 - phase: 0 /partial
         (403 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29739.m003664 Glucan endo-1,3-beta-glucosidase precursor, putative    305   1e-82

>29739.m003664 Glucan endo-1,3-beta-glucosidase precursor, putative
          Length = 1509

 Score =  305 bits (154), Expect = 1e-82
 Identities = 280/322 (86%)
 Strand = Plus / Plus

                                                                       
Query: 65  ttaaggaggtgaaagggctagcttgcaactggggaacacaaacaactcaccctctacaac 124
           |||||| ||| | |||||| || |||||||||||| |||||||||||||||||||||| |
Sbjct: 107 ttaagggggtaagagggctggcatgcaactggggagcacaaacaactcaccctctacagc 166

                                                                       
Query: 125 ctagcatagtggtccggcttttgaaggagaatggctttgacaaagttaagttatttgaag 184
           |||||||||| || | ||| ||||| || ||||| |||||||| |||||| |||||||||
Sbjct: 167 ctagcatagttgttcagctgttgaaagacaatggttttgacaaggttaagctatttgaag 226

                                                                       
Query: 185 ctgatcctggtgctttgaaggctttagggcattctggtatccaagttatggttggaatac 244
           |||| || ||  |  | |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 227 ctgaaccagggccactcaaggctttagggcattctggtatccaagttatggttgggatac 286

                                                                       
Query: 245 caaatgatttattgggacctctttcaagtagtgttcaggctgctatcaactgggttcaac 304
           |||||||| | |||| ||| ||| ||||||| || ||||||||| | |||||||||||||
Sbjct: 287 caaatgatctcttggcaccacttgcaagtagcgtccaggctgctgtaaactgggttcaac 346

                                                                       
Query: 305 agaatgtttcagattatatatccaaacatggagtggatatcaggtatgtagctgtaggga 364
           ||||||| ||  |||| ||||||||| ||||||||||||| ||||||||||||||||| |
Sbjct: 347 agaatgtgtctaattacatatccaaatatggagtggatataaggtatgtagctgtaggaa 406

                                 
Query: 365 atgagcctttcctcaagaccta 386
           ||||||||||| | ||||||||
Sbjct: 407 atgagcctttcttgaagaccta 428