Jatropha Genome Database
- JcCA0308071.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0308071.10 - phase: 2 /pseudo/partial
(913 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29929.m004746 DELLA protein GAI1, putative 321 4e-87
30147.m013794 DELLA protein RGL1, putative 64 2e-09
>29929.m004746 DELLA protein GAI1, putative
Length = 1524
Score = 321 bits (162), Expect = 4e-87
Identities = 413/494 (83%), Gaps = 7/494 (1%)
Strand = Plus / Plus
Query: 201 cttgtcaagactgcacttcagggattatatttgggcttacacagaaaggtatttagcaat 260
|||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||
Sbjct: 261 cttgccaagactccacttcagggattatatacgggcttacacagaaaggtacttagcgat 320
Query: 261 tgaggctatggaagaagcaactgcagctatggtggttagtgacaaaaatgaagttaaaga 320
|| ||||||||||||||| |||||| || || | || | ||||||||| | || ||
Sbjct: 321 cgaagctatggaagaagcagctgcaggcttgatgatcagcaagaaaaatgaaatcaagga 380
Query: 321 agaagaaggaagtgatgggatgaaactagtgcaacagctcatttcttgtgctgaagctgt 380
|||||| | ||||||||||||||||||||| || |||||| | ||||||||||||||
Sbjct: 381 agaagac---attgatgggatgaaactagtgcagcaactcattgcctgtgctgaagctgt 437
Query: 381 agcttgtcgcgacaaaacacatgcttctgcattattatccgagctaagagctaatgccct 440
||||| ||||||||||||||||||||||||||| |||| ||| | ||||||||||||||
Sbjct: 438 ggcttgccgcgacaaaacacatgcttctgcattactatctgagttgagagctaatgccct 497
Query: 441 tgtttttgggacgtcatttcaaagagttgcttcttgctttgttcaagggctatctgatcg 500
||| ||||| || |||||||||||||||||||| |||||||| |||||| | ||||||||
Sbjct: 498 tgtctttggaacatcatttcaaagagttgcttcctgctttgtccaagggttgtctgatcg 557
Query: 501 gcttgtgcttgttcaaccacttggggctgtcggaatttcagcttctccagcaaaaacaat 560
|||| ||| ||||||| || |||||||| ||| ||| || | || ||| |||||||||
Sbjct: 558 gcttacgctacttcaaccgctcggggctgtgggagttttaggtcctgcaggaaaaacaat 617
Query: 561 tactagtttcacatcagagaaggatgaagccttgcgccttttctatgaaattttgccaca 620
||||| ||| ||||||||||||| |||||||| ||| |||||||||||| || ||
Sbjct: 618 ---cagttttacagcagagaaggatgaggccttgcgtcttgtctatgaaatttgcccgca 674
Query: 621 aatccaatttggtcattttgttgcaaacgtgaccatattggaagccttttgagggagaga 680
|| ||||| ||| | ||||| || || | ||||| |||||||| |||||||||||||
Sbjct: 675 gatacaattcggttactttgtagcgaatgcaaccattctggaagcc-tttgagggagaga 733
Query: 681 gttctattcatgtt 694
||||||||||||||
Sbjct: 734 gttctattcatgtt 747
>30147.m013794 DELLA protein RGL1, putative
Length = 1581
Score = 63.9 bits (32), Expect = 2e-09
Identities = 126/156 (80%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 586 gaagccttgcgccttttctatgaaattttgccacaaatccaatttggtcattttgttgca 645
||||| ||| ||||| | |||||||||| ||||| || || |||||||| ||||| ||
Sbjct: 700 gaagcgttgagccttgtttatgaaatttgcccacatattcagtttggtcactttgtggcc 759
Query: 646 aacgtgaccatattggaagccttttgagggagagagttctattcatgttattgacttagg 705
||| | | ||||||||||||||| ||||||||||||| | | |||||| | ||||| ||
Sbjct: 760 aactcgtcaatattggaagccttt-gagggagagagttttgtccatgttgtggacttggg 818
Query: 706 tatgtcacttggcctaccacaaggccaacaatggcg 741
||| | ||||| |||||||| || || ||||||||
Sbjct: 819 aatgacccttggtctaccacatggtcaccaatggcg 854