Jatropha Genome Database
- JcCA0307901.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0307901.30 - phase: 2 /partial
(826 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29706.m001272 Protein kinase APK1B, chloroplast precursor, putative 406 e-113
29739.m003755 Protein kinase APK1B, chloroplast precursor, putative 72 6e-12
30108.m000234 conserved hypothetical protein 64 1e-09
29927.m000593 Protein kinase APK1B, chloroplast precursor, putative 64 1e-09
>29706.m001272 Protein kinase APK1B, chloroplast precursor, putative
Length = 1368
Score = 406 bits (205), Expect = e-113
Identities = 544/657 (82%)
Strand = Plus / Plus
Query: 7 ggctgaagtgatcttccttgggcgattaaagcatccccatcttgtaaatttgattggata 66
||||||||| ||||| ||||||| |||||| |||||||||||||| || |||||||| ||
Sbjct: 378 ggctgaagtaatctttcttgggcaattaaaacatccccatcttgtgaacttgattggcta 437
Query: 67 ctgttgtgaagatgagcatagacttttagtgtatgaatacatggagagaggcaacctgga 126
||| || || |||||||| || ||| | || || ||||||||||||||||||||| | ||
Sbjct: 438 ctgctgcgaggatgagcacaggcttcttgtttacgaatacatggagagaggcaacttaga 497
Query: 127 aacccagctatttgaaaagtattctgcagctttgccttggttaacaagactaaaaattgc 186
| || |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gaacctactatttaaaaggtactctgcagctttgccttggttaacaagactaaaaattgc 557
Query: 187 cattggagctgcaaaaggccttgctttccttcatgaagaagagagaaccgtcacataccg 246
||||||| |||||||||||||| ||||| ||||||||||||| | || | ||||||
Sbjct: 558 acttggagcagcaaaaggccttgccttcctccatgaagaagagaagccagttatataccg 617
Query: 247 cgattttaaggcttcgaatgttcttctggactcagactataatgcaaagctttcagattt 306
|||||||||||||| || || || | ||| | |||| |||||||||||||||||||||
Sbjct: 618 agattttaaggcttcaaacgtgctattagacgcggactttaatgcaaagctttcagattt 677
Query: 307 tggactagcaacagatggtccacaaggagatgacacacacataactactcgtgttatggg 366
||| |||||||||||||||||||||||||||| | ||||| | || |||||||||||
Sbjct: 678 tgggttagcaacagatggtccacaaggagatgaatcgcacatttcaacgcgtgttatggg 737
Query: 367 cactgaaggctatgctgtttctgaatatataatgactggtcacttgacaactacgagcga 426
||| |||||||| |||| | ||||||| |||||||| || ||||||||| ||| ||| ||
Sbjct: 738 cacggaaggctacgctgctcctgaatacataatgacagggcacttgacagctatgagtga 797
Query: 427 tttattcagttttggagttgtgcttttggaattactgaccggtaggcgatctttggacaa 486
| |||||||| ||||| || || | || | | || ||||||||||| |||||||
Sbjct: 798 cgtgttcagtttcggagtagtactgctagagctgttaacgggtaggcgatccgtggacaa 857
Query: 487 gaaccgtccatcaagagagcaaaacctagtaaaatgggcaagaccatttttaatggatca 546
||| |||||||| || ||||| || | ||||||||||| ||||| || || | |||||
Sbjct: 858 gaatcgtccatctagggagcagaatttggtaaaatgggcgagacccttgttgaaagatca 917
Query: 547 tcataagcttgaccaaataatggacccaagacttgagggtcagtactcgacagaaggggc 606
|| || ||||||| |||||||||||||||||| || || ||||| || || ||||| ||
Sbjct: 918 ccacaaacttgacctaataatggacccaagactagaagggcagtattcaactgaaggtgc 977
Query: 607 aagaaaggcagctgcattggcttatcattgcttgagccacctcttcaagtctagacc 663
|||||||||||| ||||||||||| || ||||||||||| | | ||||||||||||
Sbjct: 978 aagaaaggcagcagcattggcttaccaatgcttgagccatcattgcaagtctagacc 1034
>29739.m003755 Protein kinase APK1B, chloroplast precursor, putative
Length = 1356
Score = 71.9 bits (36), Expect = 6e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 563 ataatggacccaagacttgagggtcagtactcgacagaaggggcaagaaaggcagctgca 622
||||||||||||||||| || || ||||||||| | || ||||||||||||||||||
Sbjct: 943 ataatggacccaagactggaaggccagtactcggaaactggagcaagaaaggcagctgca 1002
Query: 623 ttggcttatcattgcttgag 642
|||||||||| ||||||||
Sbjct: 1003 ttggcttatctatgcttgag 1022
Score = 63.9 bits (32), Expect = 1e-09
Identities = 113/140 (80%)
Strand = Plus / Plus
Query: 275 gactcagactataatgcaaagctttcagattttggactagcaacagatggtccacaagga 334
||||| || |||||||| || |||||||||||||| |||||| |||||||| ||||||
Sbjct: 655 gactcggattataatgctaaactttcagattttgggttagcaaaggatggtcctcaagga 714
Query: 335 gatgacacacacataactactcgtgttatgggcactgaaggctatgctgtttctgaatat 394
||| || || | | || || |||||||| ||| |||||||||||| | ||||||||
Sbjct: 715 tctgatacgcatgtttccacccgagttatgggaactcaaggctatgctgctcctgaatat 774
Query: 395 ataatgactggtcacttgac 414
|| ||||| || ||||||||
Sbjct: 775 atcatgacaggacacttgac 794
Score = 60.0 bits (30), Expect = 2e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 170 acaagactaaaaattgccattggagctgcaaaaggccttgctttccttcatgaa 223
|||||| | |||||||| ||||||||||||| || ||||||||||||||||||
Sbjct: 550 acaagaatgaaaattgctcttggagctgcaaagggtcttgctttccttcatgaa 603
>30108.m000234 conserved hypothetical protein
Length = 561
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 284 tataatgcaaagctttcagattttggactagcaacagatggtcc 327
|||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 28 tataatgcaaagctttcagattttggcctagcaagggatggtcc 71
>29927.m000593 Protein kinase APK1B, chloroplast precursor, putative
Length = 1326
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 278 tcagactataatgcaaagctttcagattttggactagcaa 317
||||| |||||||||||||||||||||||||| |||||||
Sbjct: 745 tcagaatataatgcaaagctttcagattttggtctagcaa 784