Jatropha Genome Database
- JcCA0307631.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0307631.30 - phase: 0
(1815 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29579.m000199 NADH-ubiquinone oxidoreductase, putative 2177 0.0
>29579.m000199 NADH-ubiquinone oxidoreductase, putative
Length = 2235
Score = 2177 bits (1098), Expect = 0.0
Identities = 1634/1815 (90%)
Strand = Plus / Plus
Query: 1 atgaagattaagacagacacacctgtggcaaagaaggcacgcgaaggggttatggaattt 60
|||||||| ||||| ||||||||| |||||||||||||||| |||||||| ||||| |||
Sbjct: 421 atgaagatcaagactgacacacctttggcaaagaaggcacgtgaaggggtgatggagttt 480
Query: 61 ttgctcatgaaccatccattggattgtccaatttgtgatcaaggtggagagtgtgatctt 120
||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgctaatgaatcatcctttggattgtccaatttgtgatcaaggtggagagtgtgatctt 540
Query: 121 caggatcaatctatggcatttggatcagatcgtggccgatttactgaaatgaagcgatct 180
|||||||| |||||||| |||||||| || |||||||| || ||||||||||||||||||
Sbjct: 541 caggatcagtctatggcttttggatctgaccgtggccgcttcactgaaatgaagcgatct 600
Query: 181 gtggttgataagaatcttggtcctttggtgaagactgtgatgactcggtgtattcagtgc 240
|||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 601 gtggttgacaagaaccttggtcctttggtgaagactgtgatgactcgttgtattcagtgc 660
Query: 241 acaaggtgtgtcaggtttgcaacagaaattgctggagtccaggatcttggcatgttaggt 300
||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 661 acaagatgtgtcagatttgcaacagaagttgctggagtccaggatcttggcatgctaggt 720
Query: 301 cgtggcagtggagaagaaattgggacttatgttgaaaagctcatgacaagtgaactttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgtggcagtggagaagaaattgggacttatgttgaaaagctcatgacaagtgaactttct 780
Query: 361 ggaaatgtgatagatatctgtcctgttggagcccttacttcaaaaccttttgcatttaaa 420
||||||||||||||||| ||||||||||||||||| || ||||| |||||||| ||||||
Sbjct: 781 ggaaatgtgatagatatttgtcctgttggagccctcacctcaaagccttttgcgtttaaa 840
Query: 421 gcccggaattgggaattgaaagggacagaaagcattgatgttagtgatgcggttggatcc 480
||||| || ||||| ||||||||||| || ||||||||||| | ||||||||||||||||
Sbjct: 841 gcccgaaactgggagttgaaagggacggagagcattgatgtcactgatgcggttggatcc 900
Query: 481 aacattcggattgatagtagaggtccggaggtcatgcgcatcattccgcggttaaatgag 540
||||||||||||||||| ||||| || |||||||||||||| |||| ||| ||||||||
Sbjct: 901 aacattcggattgatagcagaggaccagaggtcatgcgcattgttccacggctaaatgag 960
Query: 541 gacataaatgaagaatggatatcagataagactcggttttgctatgatggtctgaagagg 600
||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 961 gacattaatgaagaatggatatcagataagactcggttttgttatgatggtttgaagagg 1020
Query: 601 cagagactcaacgaccctatgattcgtggcacggatgggcgctttaaggctgtgagctgg 660
||||| || || || || ||||||||||| | ||||| |||||||| ||||||||||||
Sbjct: 1021 cagaggctaaatgatcccatgattcgtggtgctgatggacgctttaaagctgtgagctgg 1080
Query: 661 cgtgatgccttagctgtagttgctgaggtaatacatcaagttaaacctgaggaaattgtt 720
|||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 1081 cgtgatgctttagctgtagttgcagaggttatgcatcaagttaaaccagaggaaattgtt 1140
Query: 721 ggagttgctggtaagctgtctgatgctgaatccatgatggcactgaaagatttcttgaat 780
||||||||||| ||| |||||||||||||||| |||||||| |||||||| ||||| ||
Sbjct: 1141 ggagttgctggaaagttgtctgatgctgaatcaatgatggctctgaaagacttcttaaac 1200
Query: 781 aaaatggggtcaaataatgtctggtgtgaaggaaatggcccaaacccaaatgctgatcta 840
|||||||| || ||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 1201 aaaatgggatcggataatgtgtggtgtgaaggaaatggcccaagcccaaatgctgatcta 1260
Query: 841 cgatctggatatataatgaatagtagcattagtgggcttgagaaggcagatgtcttcctt 900
|||||||||||||| |||||||| ||||| ||||| |||||||||||||| || ||||||
Sbjct: 1261 cgatctggatatatcatgaatagcagcataagtggtcttgagaaggcagacgtattcctt 1320
Query: 901 ttggttggtactcagccaagagtagaagctgccatggtaaatgctagaattcgcaagaca 960
|||||||| || ||||| ||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 1321 ttggttggcacccagcctagagtggaagctgccatggtaaatgcaagaattcgcaagaca 1380
Query: 961 gttcgtgcaaccaatgctaaggttggttatattggccctccatctgatttcaactatgat 1020
|| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 1381 gtccgtgcaaccaatgctaaggttggttacattggccctcccactgatttcaactatgac 1440
Query: 1021 tgtgagcatcttggcactggccctcaaactctccttgaaattgctgaaggtcgtcatcct 1080
| ||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||
Sbjct: 1441 tctgagcatcttggcactgaccctcaaactcttcttgaaattgctgagggtcgtcatccc 1500
Query: 1081 ttttactcaaaaatcttaaatgccaaaaacccagcaattattgttggtgctggaatcttt 1140
|| | ||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 1501 ttcttctcaacaatcttaaatgccaaaaacccggcaatcattgttggtgctggaatcttt 1560
Query: 1141 gaaagatcggacaaggatgcaattttttctactgttgacgccattgcnnnnnnngcaaat 1200
|| ||| | ||||||||||||||||||||| | || || |||||||| | |||
Sbjct: 1561 gagagaacagacaaggatgcaattttttctgcagtagaagccattgctaaaaaggggaat 1620
Query: 1201 gttgtgagacctgattggaatgggttcaatgtgttgcttctcaatgctgcacaagctgcg 1260
||||| ||||||| |||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 1621 gttgttcgacctgactggaatgggttcaatgtgttacttctcaatgctgcccaagctgca 1680
Query: 1261 gcccttgaccttggacttgtgccagaatccagccagagtattgagtctgccaagtttgtg 1320
|||||||||||||||||||| |||||||| || ||||||||||||||| ||||||||||
Sbjct: 1681 gcccttgaccttggacttgtaccagaatctggcaagagtattgagtctggcaagtttgtg 1740
Query: 1321 tatttgatgggtgctgatgatgtgaacttggacaagctgccaaatgatgcctttttggta 1380
||||||||||| ||||| || ||||||||||||||||||||||||||||||||| | ||
Sbjct: 1741 tatttgatgggcgctgacgacgtgaacttggacaagctgccaaatgatgcctttgtagtt 1800
Query: 1381 tatcaggggcaccatggggaccgtggtgtatatcgtgccaatgtcattttgccagcagca 1440
|| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||
Sbjct: 1801 taccaggggcaccatggggaccgtggtgtgtatcgagccaatgtcattttgccagcatca 1860
Query: 1441 gcatttactgaaaaggaaggtacctatgcgaacacagaagggtgtgcacaacagactttg 1500
||||||| |||||||||||| || |||| || |||||||| |||||||||| ||||||
Sbjct: 1861 gcatttagtgaaaaggaagggacttatgtaaatacagaaggatgtgcacaactaactttg 1920
Query: 1501 cctgcagttccaacagttggtgatgcaagggatgactggaagataattcgggctctctct 1560
||||||||||| || || |||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1921 cctgcagttccgacggtcggtgatgctagggatgattggaagataattcgggctctctct 1980
Query: 1561 gaggtagcaggggcacgcttgccctatgattcaattggtgccatccgatcccggattaga 1620
|||||| |||||||||||||||||||||||||| |||| || ||||| ||||| || ||
Sbjct: 1981 gaggtatcaggggcacgcttgccctatgattcacttggggctatccgttcccgcatgagg 2040
Query: 1621 aatgttgcacccaatctcttgagcctggatgagagagagccagctactttttgggcttcg 1680
| ||| ||||| || ||||| ||| | ||||||||||||||||||| |||| | |||||
Sbjct: 2041 actgtggcaccaaacctcttaagcatagatgagagagagccagctatttttggagcttca 2100
Query: 1681 ttgaagcctgagtgcactcaaaagattagttcaacaccattcaatgcttccgtagagaat 1740
|||||||||||||||| || ||||| |||||||| |||||||| || | |||||||||
Sbjct: 2101 ctgaagcctgagtgcacccagaagatgagttcaactccattcaagtctgcggtagagaat 2160
Query: 1741 ttttacatgactgatgccattacaagggcttcaaagataatggcacaatgcagtgcactg 1800
||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 2161 ttttacatgactgatgcaattaccagggcgtcaaagataatggcacaatgcagtgcactt 2220
Query: 1801 ctattaaagaagtga 1815
|||| ||||||||||
Sbjct: 2221 ctatcaaagaagtga 2235