Jatropha Genome Database
- JcCA0307381.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0307381.20 - phase: 0
(552 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004536 protein binding protein, putative 460 e-129
29661.m000907 signal transducer, putative 56 2e-07
>29848.m004536 protein binding protein, putative
Length = 1854
Score = 460 bits (232), Expect = e-129
Identities = 470/548 (85%), Gaps = 6/548 (1%)
Strand = Plus / Plus
Query: 8 aggagcatccaagtttgacaaaggctgaaaggaagaagatatgtggactaatggatgtca 67
|||||||||| | |||||||||||||||||||||||| ||| |||| || ||||||||||
Sbjct: 1310 aggagcatcccaatttgacaaaggctgaaaggaagaaaataagtgggctgatggatgtca 1369
Query: 68 aaaaattcacagtgaatgcatccatgcatgctgcacagaatgagcggctcccacttcgtg 127
||||| | ||| || ||||||||||||||||||| ||||||||||| || ||||| ||||
Sbjct: 1370 aaaaactaacaatggatgcatccatgcatgctgcgcagaatgagcgactgccactccgtg 1429
Query: 128 tcgtggtgcaagttctcttttttgagcaggttagagcaagtgctggtgttcaagctctca 187
| || || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1430 ttgtagtccaagttctcttttttgagcaggttagagcaagtgctggtgttcaagctctcc 1489
Query: 188 acaacgttccccgggatgctacaaattccacgacaaacacagatgaagaatgggaaaaag 247
||| | |||||| ||||| ||||||||| ||| ||||| ||||||||||| || ||
Sbjct: 1490 acagcaatccccgctatgcttcaaattccatgacgaacactgatgaagaatgtgagaaga 1549
Query: 248 cagcagcagatgataacaaatctgtcaagaagcagatgagtcaactgaagataaaagatg 307
| ||||| || || ||||| || | ||||| ||| |||||||||||||| |||||||||
Sbjct: 1550 cggcagcggaagacaacaagtccatgaagaaacaggtgagtcaactgaaggtaaaagatg 1609
Query: 308 aagaacttcagaagactggaaaaatgatgaagaaaaacagcaagaacagtaaaagcggta 367
||||||| || || | || | || | | |||||||||||||||||||| |||||||| |
Sbjct: 1610 aagaactccataaaaatgaacaactaacaaagaaaaacagcaagaacagcaaaagcggca 1669
Query: 368 tacagttactgccatctcgatcaaggaggatatttgacaagttgtgggttgtggga---a 424
| || || ||||||||||| || ||||||||||||||||||||||||||||| ||| |
Sbjct: 1670 tccaattgctgccatctcggtcgaggaggatatttgacaagttgtgggttgtaggaggca 1729
Query: 425 aaggtcatggtggagagaacagaagctcagagacatctgggagttcacaaagcccaactt 484
|||| | || ||| || ||||| ||||||||||| || |||||||||||||||||||
Sbjct: 1730 aagggaa---tgtagaaaatagaagttcagagacatcaggaagttcacaaagcccaactt 1786
Query: 485 caatggttccaggggacaccaaatcctctggctcatcttcaagacacaggagacattcca 544
|||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 1787 caattgttccaggagacaccaaatcctcaggctcatcttcaagacacaggagacactcca 1846
Query: 545 tctcctaa 552
||||||||
Sbjct: 1847 tctcctaa 1854
>29661.m000907 signal transducer, putative
Length = 1467
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 90 catgcatgctgcacagaatgagcggctcccacttcgtgtcgtggtgcaagttctcttttt 149
||||||||||| || ||||||||||| ||| | || || || ||||| |||||||||||
Sbjct: 984 catgcatgctgtgcaaaatgagcggcttccattgcgggttgttgtgcaggttctcttttt 1043
Query: 150 tgagcaggttag 161
||| ||||||||
Sbjct: 1044 tgaacaggttag 1055