Jatropha Genome Database
- JcCA0307381.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0307381.10 - phase: 0 /partial
(1545 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004537 conserved hypothetical protein 1039 0.0
>29848.m004537 conserved hypothetical protein
Length = 1551
Score = 1039 bits (524), Expect = 0.0
Identities = 1211/1439 (84%), Gaps = 5/1439 (0%)
Strand = Plus / Plus
Query: 85 gactcaaaatgcaaagcatggcttgtccaatcgattcccaccgacatgccccaactccgt 144
|||||| |||||||||||||||| |||||||| ||||| ||||||||||| || |||| |
Sbjct: 85 gactcacaatgcaaagcatggctggtccaatcaattcctaccgacatgcctcacctccat 144
Query: 145 cgcgttcctggcgttctcaccaccggagatgttctccgttggttggctggtaactctacc 204
| ||| | || ||||| ||||||| || || || |||||||| || |||||| | ||
Sbjct: 145 caagtttccggtgttctttccaccggggacgtgcttcgttggttagccggtaacgcaact 204
Query: 205 aagggattggatattatagctcaatactggcaactaattgcgaactctaaagatcctcgt 264
|||||||| ||| ||||||| ||||||||||| |||||||| || || |||| || ||
Sbjct: 205 aagggattagatgttatagcacaatactggcagctaattgcaaatcctgaagacccaagt 264
Query: 265 tccggggattatggatattccaaaagcgacatggaaaagttcggtgcttttgaaggtttt 324
||||| || || ||||| ||| || ||||| ||| || |||||||||||||| | |
Sbjct: 265 tccggagaatacggatactccgaacagaacatgacaaactttggtgcttttgaagggtct 324
Query: 325 ggcgtttataaagccatagaaaacgccgccgatcgcaatgttagtatcagattactacag 384
||||||||| |||||||| | || || ||||||||||| ||||||||||| |||||
Sbjct: 325 tctgtttataaatccatagaagatgctgcagatcgcaatgtcagtatcagatttttacag 384
Query: 385 cactcaggtgtctatcctgacttcaccaaagaacccaatgatcttgcttcaggaaggcta 444
|| |||||||| | |||||| | ||| ||||| || ||||| |||||||||||||| |
Sbjct: 385 cattcaggtgtgtctcctgattacactaaagagccggatgatattgcttcaggaagggaa 444
Query: 445 aatgtggacaatgtaactttgttacttggcgaatggtggggttcaggtatagttcatgcc 504
|||||||| ||||| ||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 445 aatgtggaaaatgtgactttattacttggagaatggtggggctcaggtatagttcatgcc 504
Query: 505 aaagtttggatatccgacagtcgagatgtgtatattggatctgcaaacaatgattggaaa 564
|| ||||||||||| || | | | | ||||| ||||||||||| ||||| |||||||||
Sbjct: 505 aaggtttggatatctgataataaacaagtgtacattggatctgctaacaacgattggaaa 564
Query: 565 tctcttactcaggttaaggaggttggaatttatcttgttggatgtnnnnnnntagtggga 624
|||||||||||||||||||||||||| |||||||||||||||||| | ||| ||
Sbjct: 565 tctcttactcaggttaaggaggttgggatttatcttgttggatgtaaaaagattgtgaga 624
Query: 625 aaagttgagacttactttgaaaacctatggaaacttgcccatcttaattcatctgcttac 684
|| || |||| |||||||||||| |||||| ||||||||||||| ||||||| ||||||
Sbjct: 625 aaggtggagaactactttgaaaacttatggacacttgcccatcttgattcatcagcttac 684
Query: 685 actagatcagtatgggatcagcagtggcagatcaatagaactgttccgtgttggtcacat 744
||||| | ||||||||||||||||||||||| | |||||| ||||| || ||||| |||
Sbjct: 685 actagtaccgtatgggatcagcagtggcagattagtagaacagttccttgctggtctcat 744
Query: 745 ttcattgactctaaagcaaggtgcagatctcctcttccaact---tttgtggaggttcca 801
||| || | ||||| | ||||||||| ||||||||||| | |||||||||||| |
Sbjct: 745 ttccttcattctaaggaaaggtgcaggtctcctcttccccatcggtttgtggaggtttcc 804
Query: 802 catgttgcaggctatcctgtattatcagacccacatatgattaaagttccaattaaaact 861
||||| || ||||||||||| ||||||||||||||||| || |||||||||||| ||||
Sbjct: 805 catgtcgccggctatcctgtgctatcagacccacatatgtttgaagttccaattataact 864
Query: 862 cctgggcaaagatt-ttcaactttggagccttatctgagctatctatcttttgctcctcc 920
||||| || ||| ||||||||| |||||| | |||||||| ||||||||||||||||
Sbjct: 865 cctgga-aacgatgattcaactttagagcctgaattgagctatttatcttttgctcctcc 923
Query: 921 tgagctatcatttggcaagtaccagactgatgagcaggggtggattgatacaataaaatc 980
|||||||||||| ||||||| ||||||||||| |||| ||| ||||||||||||| ||
Sbjct: 924 tgagctatcattcggcaagtttcagactgatgaacaggcatgggttgatacaataaagtc 983
Query: 981 tgttggaagtggatcaacagttaggattaataccatggattggcttggccaatctcaatt 1040
||||||||||||| |||| |||||||||||||| ||||||||||||||||| || ||||
Sbjct: 984 tgttggaagtggagcaacggttaggattaatactatggattggcttggccagtcacaata 1043
Query: 1041 tacaaaggaaaaggtttattggtcatctctctcctccgcaatatctgaggtaatcttctc 1100
||||||| |||||||||| ||||| | || ||||| |||||||| ||||| |||||||
Sbjct: 1044 tacaaagcaaaaggtttactggtccttgctatcctctgcaatatcagaggtcgtcttctc 1103
Query: 1101 caagcatgcaacggtgaaggtactggtagcatactgggcacatttcatcgacaacacaga 1160
||||||||| || || ||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 1104 caagcatgcgacagtaaagatactggtagcatactgggcacacttcatcaacaacacaga 1163
Query: 1161 tcagtatctgaagtctctcctttattccgatatcctctgtaattcttctaagtataacaa 1220
||||||||||| || || || |||||| || |||| || |||||| ||||| |||||
Sbjct: 1164 acagtatctgaattcgctactctattccaatgtcctatgctcttcttcaaagtacaacaa 1223
Query: 1221 gtgccacggtaaagtggagataaaatactatgtggttcctggttacaacctgacaggacc 1280
|| || ||||||||||| ||||||||||||||||| |||||||| | |||||||||
Sbjct: 1224 ctgttctggcaaagtggagatcaaatactatgtggttccgggttacaatcagacaggacc 1283
Query: 1281 tgcaaccaggaatggaaaaagaacagggaataaataccctgcttttaccagagtaaatca 1340
||||| ||| ||||| | |||||||| |||| || || |||||| |||| || |||||
Sbjct: 1284 tgcaatcagcaatgggaccagaacaggaaatatctatccagctttttccagggtgaatca 1343
Query: 1341 tggaaaatatgcagtaagcgacgtaagagcccacattggaacaagcaaccttgtatggga 1400
||||||||||||||| || || || |||| |||||||||||||||||||||||||||||
Sbjct: 1344 tggaaaatatgcagttagtgatgtgcgagcacacattggaacaagcaaccttgtatggga 1403
Query: 1401 ttatttctatacaacagctggtgtcagctttgggacatacaaccctgctattgttttaca 1460
||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||
Sbjct: 1404 ctatttctatacaacagctggtatcagctttggaacatacaaccctactattgttttaca 1463
Query: 1461 acttcagaagatctttgatgctgactgggattcaccatatgctgttccatttgaagggc 1519
|||||| ||||||||||||| |||||| |||||||||||||| ||||| |||||||||
Sbjct: 1464 acttcaagagatctttgatgccgactggaattcaccatatgctattccagttgaagggc 1522