Jatropha Genome Database
- JcCA0307051.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0307051.30 - phase: 0
(732 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29447.m000031 40S ribosomal protein S8, putative 626 e-179
27613.m000623 40S ribosomal protein S8, putative 143 2e-33
>29447.m000031 40S ribosomal protein S8, putative
Length = 666
Score = 626 bits (316), Expect = e-179
Identities = 561/646 (86%), Gaps = 25/646 (3%)
Strand = Plus / Plus
Query: 101 gactccatgcacaagaggcgtgccactggtggcaaaaagaaggcctggagaaagaagaga 160
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 16 gactccatgcacaaaaggcgtgccactggtggcaaaaagaaagcctggagaaagaagaga 75
Query: 161 aac-------------------ctgcaaataccaagctttcaagcaacaagacagtaaga 201
|| ||||||||||||||||||||||||| ||||| || ||
Sbjct: 76 aagtatgagcttggtcgtcaggctgcaaataccaagctttcaagcaataagactgtgagg 135
Query: 202 aggattcgtgttagaggaggcaatgttaagtggagagccctgagattggacacaggaaat 261
|||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||
Sbjct: 136 aggattcgtgttagaggaggaaatgtgaagtggagagctttgagattggacacgggaaat 195
Query: 262 tattcctggggtagtgaggctgttacccgcaagactcgtatccttgatgtggtttataat 321
||||| ||||||||||||||||| || |||||||||||||| |||||||||||||| |||
Sbjct: 196 tattcttggggtagtgaggctgtcactcgcaagactcgtattcttgatgtggtttacaat 255
Query: 322 gcctccaacaacgaacttgttaggacccaaactttggtgaagagtgctattgttcaggtt 381
||||| || || || ||||||||||| |||||| |||| |||||||||||||||||||||
Sbjct: 256 gcctctaataatgagcttgttaggacacaaactctggttaagagtgctattgttcaggtt 315
Query: 382 gatgctgctccatttaagcaatggtatctccagcactatggtgttgacataggcaggaag 441
||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 316 gatgcagctccatttaagcaatggtatcttcagcactatggtgttgatattggcaggaag 375
Query: 442 aagaagactgttgctaagaaggaaactactgaggaaggggatgctgctgctcctgccacg 501
||||||||||| || ||||||||| |||||||||||||| | | | | ||| |
Sbjct: 376 aagaagactgtagcaaagaaggaa---actgaggaaggggaaggggaaggtgctg---ct 429
Query: 502 gcagaggaagctaagaagagcaaccatgtacagaggaagcttgagaaacgccagaaggat 561
||||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 430 gcagaggaatctaagaagagcaaccatgtgattaggaagcttgagaagcgccaaaaggat 489
Query: 562 cgtaagcttgaccctcacattgaagagcaatttggagctggaagattgttggcctgcatc 621
||||||||||| | |||||||||||||| ||| | | ||| ||||| |||||||||||
Sbjct: 490 cgtaagcttgatgcccacattgaagagcagttttggggtggtagattactggcctgcatc 549
Query: 622 tcatctcgacctggtcaatgtggcagagctgatgggtacatattggagggtaaggaactt 681
||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 550 tcatcccgtcctggtcaatgtggcagagctgacgggtacatattggagggtaaggaactt 609
Query: 682 gagttctatatgaagaagatccaaaagaagaagggcaagggtgctg 727
|||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 610 gagttctatatgaagaagctccaaaggaagaagggcaagggtgctg 655
>27613.m000623 40S ribosomal protein S8, putative
Length = 660
Score = 143 bits (72), Expect = 2e-33
Identities = 156/184 (84%)
Strand = Plus / Plus
Query: 268 tggggtagtgaggctgttacccgcaagactcgtatccttgatgtggtttataatgcctcc 327
||||||||||| ||||||||||| ||||| | || ||||||||||| || ||||| ||
Sbjct: 202 tggggtagtgaagctgttacccgaaagaccagaattcttgatgtggtgtacaatgcatct 261
Query: 328 aacaacgaacttgttaggacccaaactttggtgaagagtgctattgttcaggttgatgct 387
||||| || |||||| | || |||||||||||||||||||| ||| |||||||||||||
Sbjct: 262 aacaatgagcttgttcgtactcaaactttggtgaagagtgccattattcaggttgatgca 321
Query: 388 gctccatttaagcaatggtatctccagcactatggtgttgacataggcaggaagaagaag 447
|| || || ||||| |||||||| ||||||||||| |||||||| ||| | ||||||||
Sbjct: 322 gcacctttcaagcagtggtatcttcagcactatggagttgacattggccgcaagaagaaa 381
Query: 448 actg 451
||||
Sbjct: 382 actg 385
Score = 77.8 bits (39), Expect = 8e-14
Identities = 132/163 (80%)
Strand = Plus / Plus
Query: 565 aagcttgaccctcacattgaagagcaatttggagctggaagattgttggcctgcatctca 624
||||||||||| || |||||||| |||||||| | ||| | || | || |||||||||
Sbjct: 487 aagcttgacccacatattgaagaacaatttggtggtggccgtctgctagcttgcatctca 546
Query: 625 tctcgacctggtcaatgtggcagagctgatgggtacatattggagggtaaggaacttgag 684
|| || || ||||| || ||| | |||||||||||||| |||||||| || || || |||
Sbjct: 547 tcacgccccggtcagtgcggccgtgctgatgggtacattttggagggcaaagagctggag 606
Query: 685 ttctatatgaagaagatccaaaagaagaagggcaagggtgctg 727
|| || ||||||||| |||| | ||||||||| ||||| ||||
Sbjct: 607 ttttacatgaagaagctccagaggaagaagggaaagggagctg 649