Jatropha Genome Database

JcCA0306971.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0306971.20 + phase: 0 /partial
         (651 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30153.m000741 porphobilinogen deaminase, putative                     486   e-137

>30153.m000741 porphobilinogen deaminase, putative
          Length = 1119

 Score =  486 bits (245), Expect = e-137
 Identities = 440/505 (87%)
 Strand = Plus / Plus

                                                                       
Query: 135 tccaaattgcatcaagaaacgtagtttcagtgtaccaagggcctcggttgctgttgaaca 194
           ||||||||||||||||||||  ||||| ||  |  |||| ||||| ||||| ||||||||
Sbjct: 105 tccaaattgcatcaagaaacaaagtttgaggatcacaagagcctctgttgccgttgaaca 164

                                                                       
Query: 195 gcaaacccaggagtctaaacttgctctcataagaattggcacaagaggaagcccactagc 254
           ||| ||||||||  | ||| |||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 165 gcagacccaggacccaaaagttgctctcattagaattggcaccagaggaagcccgctagc 224

                                                                       
Query: 255 acttgctcaggcttatgagacacgagataagctcatggcaacacattcagagttagctga 314
           ||||||||||||| |||| |||||||| || ||||||||||  ||||||||  |||||||
Sbjct: 225 acttgctcaggctcatgaaacacgagacaaactcatggcaaagcattcagaactagctga 284

                                                                       
Query: 315 agaaggggcaattcaaattgtgataataaagacaacaggagataaaatattaagtcagcc 374
            |||||||| || ||||||||||||||||||||||| ||||||||||||||||  || ||
Sbjct: 285 ggaaggggctatccaaattgtgataataaagacaaccggagataaaatattaacacaacc 344

                                                                       
Query: 375 acttgcagacataggtgggaaaggattgtttacaaaagagatagatgaggcactgataaa 434
            |||||||| || ||||| ||||||||||| |||||||| ||||||||||| || |||||
Sbjct: 345 tcttgcagatattggtggaaaaggattgttcacaaaagaaatagatgaggcgctaataaa 404

                                                                       
Query: 435 tggtgaaattgacattgcagtccactcaatgaaagatgtccctacgtatttaccagagaa 494
           ||| || ||||| ||||| ||||||||||||||||||||||| || ||||| || |||||
Sbjct: 405 tggcgagattgatattgcggtccactcaatgaaagatgtccccacttatttgcctgagaa 464

                                                                       
Query: 495 gaccatcctcccctgcaatcttgagcgagaggatgttagagatgcatttatttccttgag 554
           ||| || || || ||||| |||  ||| ||||||||||||||||||||||||||||||||
Sbjct: 465 gacaattcttccttgcaaccttccgcgcgaggatgttagagatgcatttatttccttgag 524

                                                                       
Query: 555 cgcatcatcactggctgagcttcctgctgggagtgtcattggtacagcttccctcagaag 614
           |||||| ||||| |||||||||||| |||||||||||||||| || |||||||| |||||
Sbjct: 525 cgcatcttcacttgctgagcttccttctgggagtgtcattggcactgcttccctgagaag 584

                                    
Query: 615 aaagtcgcaaatactccacagatat 639
           |||||| |||||||| |||||||||
Sbjct: 585 aaagtcacaaatacttcacagatat 609