Jatropha Genome Database
- JcCA0306791.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0306791.10 - phase: 0 /pseudo
(1806 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29651.m000296 hypothetical protein 480 e-134
30180.m001064 Auxin efflux carrier component, putative 115 1e-24
29816.m000677 Auxin efflux carrier component, putative 88 2e-16
29662.m000472 Auxin efflux carrier component, putative 72 1e-11
>29651.m000296 hypothetical protein
Length = 294
Score = 480 bits (242), Expect = e-134
Identities = 281/294 (95%)
Strand = Plus / Plus
Query: 1502 atggctttgcaaccgaggatcatagcatgtggaaattccattgcagcttttgctatggct 1561
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggctttgcaaccaaggatcatagcatgtggaaattccattgcagcttttgctatggct 60
Query: 1562 gtgagattccttacaggtccagctgtaatggcagctgcttctattgctgttggccttaga 1621
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 gtgagattccttacaggtccagctgtcatggcagctgcttctattgctgttggccttaga 120
Query: 1622 ggaacgctcttacacgttgcaattgtccaggcagctttaccacaaggaattgtccccttt 1681
|||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 ggaacgctcttacatgttgccattgtccaggcagctctaccacaaggaattgtccccttt 180
Query: 1682 gtctttgccaaggaatataacgtgcaccctgatattcttagcacaggtgttatatttggg 1741
||||||||||||||||| ||||| |||||||||||||| |||||||| || |||||||||
Sbjct: 181 gtctttgccaaggaatacaacgtacaccctgatattctcagcacaggggtgatatttggg 240
Query: 1742 atgctaattgcattgcccataactcttgtgtactacattctgttggggttgtga 1795
||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 241 atgctgattgcattgcctataactcttgtgtactacattctattggggttgtga 294
>30180.m001064 Auxin efflux carrier component, putative
Length = 1842
Score = 115 bits (58), Expect = 1e-24
Identities = 211/262 (80%)
Strand = Plus / Plus
Query: 1469 cttggcatggccatgttcagtcttggtctgttcatggctttgcaaccgaggatcatagca 1528
||||| ||||| ||||| ||||||||| |||||||||| || || || |||||||| ||
Sbjct: 1453 cttggaatggcaatgtttagtcttggtttgttcatggcattacagccaaggatcattgct 1512
Query: 1529 tgtggaaattccattgcagcttttgctatggctgtgagattccttacaggtccagctgta 1588
|||||||| || ||||| ||||||| |||||||| |||||||| || ||||| || |||
Sbjct: 1513 tgtggaaactcgattgctacttttgcaatggctgttagattcctaactggtcctgcagta 1572
Query: 1589 atggcagctgcttctattgctgttggccttagaggaacgctcttacacgttgcaattgtc 1648
||||| |||||||| ||||||| || | | ||| || || ||| | || |||||
Sbjct: 1573 atggctgctgcttcatttgctgtcggattgcgcggagttctgttgcacatagccattgtg 1632
Query: 1649 caggcagctttaccacaaggaattgtcccctttgtctttgccaaggaatataacgtgcac 1708
||||||||| | |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 1633 caggcagctcttccacaagggattgtccccttcgtctttgcaaaagaatataatgttcat 1692
Query: 1709 cctgatattcttagcacaggtg 1730
||||| ||| | ||||| ||||
Sbjct: 1693 cctgacattttgagcactggtg 1714
Score = 99.6 bits (50), Expect = 6e-20
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 688 agaccatcaaatctaaccaatgcggagatttactctttacaatcatccagaaacccaaca 747
|||||||| ||||||||||||| |||||||| ||| | ||||| || ||||| |||||
Sbjct: 697 agaccatctaatctaaccaatgtagagatttattctcttcaatcttcaagaaatccaact 756
Query: 748 ccaagaggctctagttttaatcacactgatttttactcaatg 789
||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 757 ccaagaggctcaagttttaaccatactgatttttactcaatg 798
Score = 91.7 bits (46), Expect = 1e-17
Identities = 103/122 (84%)
Strand = Plus / Plus
Query: 55 gtggctatgattttggcttatgggtctgtaaaatggtggaaaatctttactcctgatcaa 114
||||| ||||| || |||||||| || || ||||||||||| || |||| ||||||||
Sbjct: 55 gtggccatgatcttagcttatggctccgtgaaatggtggaagatttttagccctgatcag 114
Query: 115 tgttcaggaatcaatcgttttgttgctctttttgcagtccctcttctttcttttcacttt 174
|||||||| ||||| | ||||||||||| |||||||| ||| | |||||||||||||||
Sbjct: 115 tgttcagggatcaacagatttgttgctctatttgcagttcctttgctttcttttcacttt 174
Query: 175 at 176
||
Sbjct: 175 at 176
Score = 89.7 bits (45), Expect = 5e-17
Identities = 213/269 (79%)
Strand = Plus / Plus
Query: 313 ttttcactttctactcttccaaatactcttgttatgggtattcctttgcttaaaggaatg 372
||||| ||||| |||||||| ||||||||||||||||| || |||||| | || || |||
Sbjct: 313 ttttctctttccactcttcctaatactcttgttatgggcatccctttgttgaagggtatg 372
Query: 373 tatggtgaattttctggtagtttgatggtgcaaattgttgttcttcaatgtattatttgg 432
||||| || || || ||| | ||||| ||||| ||||| |||||||| || || |||
Sbjct: 373 tatggggatgactcagggagtcttatggtccaaatagttgtccttcaatgcataatatgg 432
Query: 433 tatactttaatgcttttcatgtttgaatatagaggtgctaaaatgcttatttctgagcag 492
|||||||| ||||| || |||||||||||||||| |||| | | | ||| ||| |||
Sbjct: 433 tatactttgatgctctttctgtttgaatatagaggagctagactcttgattggtgaacag 492
Query: 493 tttccagacactgctggttctattgtctccatccatgttgattctgatatcatgtctctt 552
||||| || |||||||| ||||| | ||| | ||||||||||||||||| ||| |
Sbjct: 493 tttcctgatactgctggctctataatatcctttagagttgattctgatatcatatcttta 552
Query: 553 gatggaagacaacctttagaaactgaagc 581
||||| ||| |||| || ||||||||||
Sbjct: 553 gatggtagagaaccattgcaaactgaagc 581
>29816.m000677 Auxin efflux carrier component, putative
Length = 1941
Score = 87.7 bits (44), Expect = 2e-16
Identities = 260/332 (78%)
Strand = Plus / Plus
Query: 1448 tctattctgtcagatgcagggcttggcatggccatgttcagtcttggtctgttcatggct 1507
||||| ||||||||||| || ||||| ||||| |||||||| | ||||| || |||||
Sbjct: 1594 tctatactgtcagatgctggtcttggaatggctatgttcagcttaggtctttttatggcg 1653
Query: 1508 ttgcaaccgaggatcatagcatgtggaaattccattgcagcttttgctatggctgtgaga 1567
|| ||||||| ||| || |||||||| || || | || || ||||| |||||||| ||
Sbjct: 1654 ttacaaccgaagataattgcatgtgggaactcagtagctgcatttgcaatggctgtccga 1713
Query: 1568 ttccttacaggtccagctgtaatggcagctgcttctattgctgttggccttagaggaacg 1627
|||||||| ||||| || || ||||| || ||||| || ||||||||||| | || ||
Sbjct: 1714 ttccttactggtcctgcagtgatggctgcagcttcaatcgctgttggcctgcgtggtacc 1773
Query: 1628 ctcttacacgttgcaattgtccaggcagctttaccacaaggaattgtcccctttgtcttt 1687
||| | | | | || ||||| ||||| || |||||||||||||||| || ||||| |||
Sbjct: 1774 ctcctccgcatcgctattgttcaggctgcactaccacaaggaattgttccatttgtgttt 1833
Query: 1688 gccaaggaatataacgtgcaccctgatattcttagcacaggtgttatatttgggatgcta 1747
|| || || || || || || || | ||||||||||| | ||||| ||||||||| |
Sbjct: 1834 gctaaagagtacaatgtccatccagccattcttagcactgcggttatctttgggatgttg 1893
Query: 1748 attgcattgcccataactcttgtgtactacat 1779
|| || ||||| || |||||||| ||||||||
Sbjct: 1894 atagctttgccaattactcttgtctactacat 1925
>29662.m000472 Auxin efflux carrier component, putative
Length = 1907
Score = 71.9 bits (36), Expect = 1e-11
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 1457 tcagatgcagggcttggcatggccatgttcagtcttggtctgttcatggctttgcaaccg 1516
||||||||||| || || ||||| ||||||||||| ||| | ||||||||||||||||||
Sbjct: 1576 tcagatgcaggcctaggaatggctatgttcagtctaggtttattcatggctttgcaaccg 1635
Query: 1517 aggatcatagcatgtggaaa 1536
| ||| || || ||||||||
Sbjct: 1636 aagattattgcttgtggaaa 1655
Score = 60.0 bits (30), Expect = 5e-08
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 370 atgtatggtgaattttctggtagtttgatggtgcaaattgttgttcttcaatgtattatt 429
||||| || |||||||| |||||| | ||||| |||||||| || || || || | |||
Sbjct: 370 atgtacggagaattttcaggtagtcttatggttcaaattgtggtgctgcagagtgtaatt 429
Query: 430 tggtatactttaatgcttttcatgtttgaatatagagg 467
||||||||| | ||||| || |||||||||||||||||
Sbjct: 430 tggtatactcttatgctctttatgtttgaatatagagg 467